Elad, If it is only moving the coordinates of the co-factor and placing it in the density, once you load the coordinate file for your co-factor into the wincoot, it is pretty much drag and rotate process by using the option "Rotate/Translate Zone"
But if your question is with respect to playing with the geometry of the co-factor, you need to generate/download the cif file and read it into the coot. You can refer to the previous ccp4 previous thread given below with respect to this. http://www.mail-archive.com/ccp4bb@jiscmail.ac.uk/msg07769.html Anthony On Mon, 16 Feb 2009 11:26:35 +0000, Elad Binshtein wrote > i have a density map and a model and i want to place the cofactor. > i use wincoot and find the electron density for the cofactor but... > how can i move the cofactor and play with it in this area? ------------------------------------------------- Anthony Addlagatta, Ph.D. Ramanujan Fellow and Senior Scientist Center for Chemical Biology Indian Institute of Chemical Technology [IICT] Tarnaka, Hyderabad- 500007, INDIA Tel:+91-40-27191583 Url: http://www.iictindia.org/zacb/Dr.%20Anthony.aspx
