Hi Andy, where shall I start?
1.) Where is your probe.exe and reduce.exe? These should either be in your global PATH or in driveletter:\YourWinCootDirectory\bin. 2.) if you want to point to specific probe/reduce.exe files. These should be given in the .(dot)coot.py file (which in WinCoot is read from $COOT_HOME [driveletter:\YourWinCootDirectory]). 3.) Current WinCoot does not read .scm files. However the molprobity web page should provide a python (py) file too. Which you can read. Hope this helps, Bernhard P.S. There is a Coot BB (http://www.jiscmail.ac.uk/lists/coot.html) were you can ask Coot specific questions (even WinCoot ones ;-) ) > Dear all, > > I am trying to use the molprobity server with WinCoot 0.6-pre-1. > > I have followed the instructions here > > http://www.ysbl.york.ac.uk/~lohkamp/coot/wincoot-faq.html > > and believe I have put probe and reduce into the right places and > pointed to them in the coot.py script. > > however, when I load up the protonated molecule generated in > molprobity, Probe clashes is still greyed out under the validate tab. > > Further, I tried to run teh .scm file produced by the server under > Calculate -> Run Script, but that does nothing at all. > > I am in a muddle here, any help please? > > Cheers > > Andy. > ---------------------------------------------------------------- This message was sent using IMP, the Internet Messaging Program.
