Hi Riya,

you could use Modeller , Robetta http://robetta.bakerlab.org or check out the Expasy server what they offer in terms of threading programs http://www.expasy.ch/tools/#tertiary

Jürgen
On 14 Jan 2009, at 13:08, riya doreen wrote:

Dear All,

I will be very grateful if someone can point me to a program for ab initio structure prediction of small peptide fragments (50-100 amino acids).

Thanks
Riya

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Jürgen Bosch
Johns Hopkins Bloomberg School of Public Health
Biochemistry and Molecular Biology, W8708
615 North Wolfe Street
Baltimore, MD 21205
Phone: +1-410-614-4742

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