I version of ESCET working in a pairwise fashion on different conformation of the same structure or structures of similar proteins with different sequences is also available as a web-server. The algorithm is called RAPIDO and you can find it here:
webapps.embl-hamburg.de/rapido And is described in the two references: http://www.ncbi.nlm.nih.gov/pubmed/18727838 http://www.ncbi.nlm.nih.gov/pubmed/18460546 Best, Roberto -- Roberto Mosca, Ph.D. Structural Bioinformatics Group Institute for Research in Biomedicine (IRB Barcelona) Parc CientÃfic de Barcelona C/ Baldiri Reixac 10-12 08028 Barcelona - Spain Email: roberto.mo...@irbbarcelona.org Tel: +34 93 403 96 89 Web: http://gatealoy.pcb.ub.es/people/roberto_mosca.html