Hi Jason,
- run your model through TLSMD server to identify TLS domains (it will
produce PHENIX friendly TLS groups selections);
http://skuld.bmsc.washington.edu/~tlsmd/
- use these selections for TLS refinement in PHENIX:
http://www.phenix-online.org/documentation/refinement.htm
for example, the command is:
phenix.refine model.pdb data.hkl
strategy=individual_sites+individual_adp+tls tls_selections.txt
Pavel.
On 10/17/2008 3:10 AM, [EMAIL PROTECTED] wrote:
Hi All,
I just refined a structure at 2.95A and getting a good R-work and
R-free(0.236 and 0.274). When I checked the PDB, I found many
residues have high temperature factor over 100. How can I use Phenix
or CNS fix those high temperature factor for further refinment?
Thank you
Jason
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