I'm not sure if this is quite what you mean, but dyndom is relatively easy to use and may get you what you want (hinges, axes, rotations etc) with least effort.

http://www.ccp4.ac.uk/dist/html/dyndom.html

Cheers,
Charlie

Benjamin Brooks wrote:
I was wondering if anyone had a simple way of describing a conformational
change by measuring the rotational and translational displacement of a
domain from a starting structure.
Thank you,
Ben B


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Charlie Bond
Professorial Fellow
University of Western Australia
School of Biomedical, Biomolecular and Chemical Sciences
M310
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