On Mon, Jan 21, 2008 at 06:28:58PM +0100, Anita Bentley wrote: > I have recently installed CCP4 6.0.2 on a Mac G5 running (still) > under OS 10.4. So far it was running OK - until tonight. > > When using superposition programmes (TOPP or Superpose) via the CCP4i > I get the following message: > > " Information from CCP4Interface script > ************************************************************************ > *** > The program run with command: topp > has failed with error message > Last system error message: No such file or directory > TOP: Open failed: File: /Users/anita/work/Integ/models/ASVcc.pdb " > > The file exists and I can run e.g. coordconv on it.
This could be a known problem. From: http://www.ccp4.ac.uk/problems.php#6.0.2-programs "Topp claims it cannot find the input files corresponding to keywords MOL1 and MOL2, even though the files exist. This can be fixed by applying the patch topp.f-r1.16.2.5-r1.16.2.6.diff (also available from ftp://ftp.ccp4.ac.uk/ccp4/6.0.2/patches) to $CCP4/src/topp_/topp.f and remaking topp." -ben -- Ben Eisenbraun Structural Biology Grid http://sbgrid.org/
