Hi,

I would suggest the indonesia program... easy to use and very flexible.

http://xray.bmc.uu.se/dennis/

Cheers

Dave

david wu wrote:
> Hi all,
> 
> I want to produce structure-based multiple sequence alignment of my protein 
> with five of its homologs on DALI server. However, when I tried the "Database 
> Search Form", only one homolog was picked up from PDB. If I align my protein 
> with each homolog by the "DaliLite Pairwise comparison", how can I combine 
> them together? 
> 
> Thanks in advance.
> 
> 
> Best regards,
>                               
> Sincerely,
> 
> Dalei Wu
> Drug Discovery and Design Center
> Shanghai Institute of Materia Medica
> Shanghai Institutes for Biological Sciences
> Chinese Academy of Sciences
> 555 Zu Chongzhi Road, Shanghai, 201203, China
> [EMAIL PROTECTED]
> 2007-12-05

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