Karen,
MolSoft offers a free online tool that predicts protein-protein
interfaces using our ICM software.
http://www.molsoft.com/oda.cgi
more information here:
http://www.molsoft.com/oda.html
Fernandez-Recio, J., Totrov, M., Skorodumov, C., Abagyan, R.Optimal
Docking Area: A New Method for Predicting Protein-Protein Interaction
Sites. Proteins 57:400-13
Thanks,
Andy
karen yates wrote:
Hi,
I would like to find a bioinformatic tool that will allow me to predict the
dimerisation interface of a protein.
A structural model has been generated, and it is known to exist as a homo-dimer.
Does anyone know of a suitable program?
Thank you for your help.
Karen
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Andrew Orry Ph.D.
Senior Scientist
MolSoft LLC
3366 North Torrey Pines Court
Suite 300
La Jolla, CA 92037
U S A
Phone: (858) 625-2000 (x108)
Fax: (858) 625-2888
www.molsoft.com
