Hall Gareth wrote:

Dear ccp4bb users,
I am currently refining a crystal structure of a protein with a drug molecule in the active site. The drug molecule is seen, as expected, to covalently bind to the active site. Therefore, can anyone tell me what I need to do to alter the pdb file so as to form a covalent bond between the protein and my drug molecule?


For refmac:

LINK:

http://www.ysbl.york.ac.uk/~garib/refmac/docs/files/coordinates.html#pdb_link

For Coot:

There is nothing you can do (today).


Paul.

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