Hi, I have a protein that binds nucleotides, and in my structure, it appears that the binding pocket is partial occupied by ADP and AMP; the beta phosphate of ADP is transfered to another molecule. I want to refine the structure with both ADP and AMP modeled in the sight and manually vary their occupancy to see what effects it will have. I was wondering if I need to keep the RESID number the same for the AMP and ADP molecule or do they need to be different?
Thanks, vu
