I have found a solution for that - use GDISK and rewrite GPT partition table.
Still, it would be nice parted to do the job :-) root@lubuntu:~# gdisk The program 'gdisk' can be found in the following packages: * gdisk * gdisk-noicu Try: apt-get install <selected package> root@lubuntu:~# apt-get install gdisk Reading package lists... Done Building dependency tree Reading state information... Done The following NEW packages will be installed: gdisk 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 186 kB of archives. After this operation, 761 kB of additional disk space will be used. Get:1 http://archive.ubuntu.com/ubuntu/ trusty/main gdisk amd64 0.8.8-1build1 [186 kB] Fetched 186 kB in 1s (154 kB/s) Selecting previously unselected package gdisk. (Reading database ... 113515 files and directories currently installed.) Preparing to unpack .../gdisk_0.8.8-1build1_amd64.deb ... Unpacking gdisk (0.8.8-1build1) ... Processing triggers for man-db (2.6.7.1-1ubuntu1) ... Setting up gdisk (0.8.8-1build1) ... root@lubuntu:~# gdisk GPT fdisk (gdisk) version 0.8.8 Type device filename, or press <Enter> to exit: /dev/sda Warning! Disk size is smaller than the main header indicates! Loading secondary header from the last sector of the disk! You should use 'v' to verify disk integrity, and perhaps options on the experts' menu to repair the disk. Caution: invalid backup GPT header, but valid main header; regenerating backup header from main header. Warning! One or more CRCs don't match. You should repair the disk! Partition table scan: MBR: protective BSD: not present APM: not present GPT: damaged **************************************************************************** Caution: Found protective or hybrid MBR and corrupt GPT. Using GPT, but disk verification and recovery are STRONGLY recommended. **************************************************************************** Command (? for help): p Disk /dev/sda: 3907029168 sectors, 1.8 TiB Logical sector size: 512 bytes Disk identifier (GUID): BFD8B9FE-8BF3-4AF3-B04C-326FC7FB5569 Partition table holds up to 128 entries First usable sector is 34, last usable sector is 7812499934 Partitions will be aligned on 2048-sector boundaries Total free space is 6890901949 sectors (3.2 TiB) Number Start (sector) End (sector) Size Code Name 1 2048 206847 100.0 MiB EF00 EFI system partition 2 206848 468991 128.0 MiB 0C01 Microsoft reserved part 3 468992 307199999 146.3 GiB 0700 Basic data partition 4 307200000 614399999 146.5 GiB A500 FreeBSD 5 614400000 921599999 146.5 GiB 0700 Basic data partition Command (? for help): w Caution! Secondary header was placed beyond the disk's limits! Moving the header, but other problems may occur! Final checks complete. About to write GPT data. THIS WILL OVERWRITE EXISTING PARTITIONS!! Do you want to proceed? (Y/N): y OK; writing new GUID partition table (GPT) to /dev/sda. The operation has completed successfully. root@lubuntu:~# parted GNU Parted 2.3 Using /dev/sda Welcome to GNU Parted! Type 'help' to view a list of commands. (parted) print Model: ATA WDC WD20EFRX-68E (scsi) Disk /dev/sda: 2000GB Sector size (logical/physical): 512B/4096B Partition Table: gpt Number Start End Size File system Name Flags 1 1049kB 106MB 105MB EFI system partition boot 2 106MB 240MB 134MB Microsoft reserved partition msftres 3 240MB 157GB 157GB Basic data partition msftdata 4 157GB 315GB 157GB FreeBSD 5 315GB 472GB 157GB Basic data partition msftdata (parted) -- CeDeROM, SQ7MHZ, http://www.tomek.cedro.info