in my mimeapps.list file I have zathura set like this: application/pdf=org.pwmt.zathura.desktop application/octet-stream=org.pwmt.zathura.desktop; application/pdf=org.pwmt.zathura-pdf-mupdf.desktop;
I noticed there are two other zathura.desktop files on my system. ~/.guix-profile/share/applications/org.pwmt.zathura.desktop ~/.guix-profile/share/applications/org.pwmt.zathura-djvu.desktop ~/.guix-profile/share/applications/org.pwmt.zathura-pdf-mupdf.desktop Perhaps I'm using the wrong one here. I also noticed I have two application/pdf lines, but the first one is from the Default Applications section and the second is from Added Associations. Deleting the first line then makes xdg-open use a browser to open the pdf, so I don't think that's the right way to go. I tried also copying the later application/pdf line and replacing the first one in the file with it, so this way it's still in the file in both sections. With this, the file opens in zathura again, but clicking links still does nothing. I'm not sure of the significance of the semicolon at the end. Some of my lines have it, and some don't. I'll attach my mimeapps.list file in case it's helpful to look over in its entirety. (file has been reverted to the state it was at the start of troubleshooting since none of the changes so far fixed the issue)
[Default Applications] x-scheme-handler/http=org.qutebrowser.qutebrowser.desktop x-scheme-handler/https=org.qutebrowser.qutebrowser.desktop x-scheme-handler/ftp=filezilla.desktop x-scheme-handler/chrome=org.qutebrowser.qutebrowser.desktop text/html=org.qutebrowser.qutebrowser.desktop application/x-extension-htm=org.qutebrowser.qutebrowser.desktop application/x-extension-html=org.qutebrowser.qutebrowser.desktop application/x-extension-shtml=org.qutebrowser.qutebrowser.desktop application/xhtml+xml=org.qutebrowser.qutebrowser.desktop application/x-extension-xhtml=org.qutebrowser.qutebrowser.desktop application/x-extension-xht=org.qutebrowser.qutebrowser.desktop image/png=sxiv-usercreated-0.desktop;sxiv.desktop; image/jpg=sxiv.desktop image/gif=mpv.desktop image/jpeg=sxiv.desktop image/webp=sxiv.desktop video/webm=mpv.desktop application/pdf=org.pwmt.zathura.desktop x-scheme-handler/magnet=userapp-transmission-gtk-W27CS0.desktop inode/directory=ranger.desktop [Added Associations] x-scheme-handler/http=org.qutebrowser.qutebrowser.desktop x-scheme-handler/https=org.qutebrowser.qutebrowser.desktop x-scheme-handler/ftp=filezilla.desktop x-scheme-handler/chrome=org.qutebrowser.qutebrowser.desktop text/html=org.qutebrowser.qutebrowser.desktop application/x-extension-htm=org.qutebrowser.qutebrowser.desktop application/x-extension-html=org.qutebrowser.qutebrowser.desktop application/x-extension-shtml=org.qutebrowser.qutebrowser.desktop application/xhtml+xml=org.qutebrowser.qutebrowser.desktop application/x-extension-xhtml=org.qutebrowser.qutebrowser.desktop application/x-extension-xht=org.qutebrowser.qutebrowser.desktop application/octet-stream=org.pwmt.zathura.desktop; application/pdf=org.pwmt.zathura-pdf-mupdf.desktop; x-scheme-handler/magnet=userapp-transmission-gtk-W27CS0.desktop; text/plain=org.xfce.mousepad.desktop;mousepad.desktop;nvim.desktop; application/json=mousepad.desktop; text/x-csrc=mousepad.desktop; image/png=sxiv-usercreated-0.desktop; text/markdown=org.xfce.mousepad.desktop; application/x-shellscript=org.xfce.mousepad.desktop;
