Hi, while trying to run a simple R script on my guix server, I stumbled upon a problem with HTTPS and R. It's nothing urgent...
reproducer.R library(jsonlite) library(tidyverse) library(lubridate) api_parking <- "https://guix.gnu.org/packages.json"; parking.raw <- fromJSON(api_parking, simplifyDataFrame = TRUE) $ R CMD BATCH reproducer.R [...] > library(jsonlite) > library(tidyverse) ── Attaching packages ─────────────────────────────────────── tidyverse 1.3.0 ── ✔ ggplot2 3.3.0 ✔ purrr 0.3.3 ✔ tibble 2.1.3 ✔ dplyr 0.8.5 ✔ tidyr 1.0.2 ✔ stringr 1.4.0 ✔ readr 1.3.1 ✔ forcats 0.5.0 ── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ── ✖ dplyr::filter() masks stats::filter() ✖ purrr::flatten() masks jsonlite::flatten() ✖ dplyr::lag() masks stats::lag() > library(lubridate) Attaching package: ‘lubridate’ The following object is masked from ‘package:base’: date > api_parking <- "https://guix.gnu.org/packages.json"; > parking.raw <- fromJSON(api_parking, simplifyDataFrame = TRUE) Error in open.connection(con, "rb") : server certificate verification failed. CAfile: none CRLfile: none Calls: fromJSON ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection Execution halted For the record my SSL/HTTPS related variables. $ echo $SSL_CERT_DIR /etc/ssl/certs echo $SSL_CERT_FILE /etc/ssl/certs/ca-certificates.crt echo $CURL_CA_BUNDLE /run/current-system/profile/etc/ssl/certs/ca-certificates.crt All required packages (r, r-*, nss-certs) are installed system wide. Regards Jonathan
