Oh, bloody h-
I just lost my entire reply to this - now attempting
to reconstruct it.  <mutters dire imprecations...all
those sites! All that time!>

> Dan Minette <[EMAIL PROTECTED]> wrote:
> > Behalf Of Deborah Harrell

> > The acting was bad, the plot had some major holes,
> > some of the science was more-than-iffy - but it
> was
> > interesting to watch, and if it made people think
> > ahead just a little bit, that might actually be
> > helpful:
> >
> http://www.webmd.com/content/article/121/114487.htm

> I didn't see the movie but did see the ABC nightline
> on the facts.  I was
> also in this debate before, and have looked up some
> facts.
> 
> They had some of the real life counterparts of
> people in the movie (the
> secretary of HHS and the governor of Virginia, as
> well as CDC scientists on
> Nightline.  The most criticized part of the show was
> the end, when the
> second wave of the flu killed 100%.  The CDC
> scientist said while nothing
> was impossible in biology, this was very very
> unlikely.  That makes sense.

Even Ebola isn't that deadly.

> If such things happened once every 100,000 years,
> the odds on humans still being here would be rather 
>low.

But that may be what happened to cheetahs - see *
below (and darnit I was right about the virus being
~12K years ago <still very vexed>). Also see **, which
I may have posted before, about a theory that a viral
infection in the Scandanavian area may have conferred
resistance to the Black Death (which may not have just
been plague bacillus), and perhaps to HIV. (I was
incorrect about that being 10K years ago; it's more
like 2500-5K years ago.)
 
> If the 1918 flu epidemic is the template for the
> next one, then the death
> rates are vastly overstated.  In some countries, the
> death rate approached
> 10%.  But, in the US it was less than 1%...0.6%
> IIRC.  I'd argue that the
> state of medicine and nutrition had a lot to do with
> the difference.

>From Wiki:
http://en.wikipedia.org/wiki/Spanish_Flu
"...Global mortality rate from the flu is estimated at
2.5% – 5% of the human population, with 20% of the
world population suffering from the disease to some
extent. It spread across the world killing 25 million
in six months; some estimates put the total killed at
over twice that number, possibly even 100 million.

An estimated 17 million died in India, about 5% of
India's population at the time. In the Indian Army,
almost 22% of troops who caught the disease died of
it. In US, about 28% of the population suffered, and
500,000 to 675,000 died. In Britain 200,000 died; in
France more than 400,000. The death rate was
especially high for indigenous peoples; entire
villages perished in Alaska and southern Africa. In
the Fiji Islands, 14% of population died during only
two weeks, and in Western Samoa 22%. In Japan, 257,363
deaths were attributed to influenza by July 1919,
giving an estimated 0.425% mortality rate..."

>From  http://www.stanford.edu/group/virus/uda/
"...The effect of the influenza epidemic was so severe
that the average life span in the US was depressed by
10 years. [I saw 12 years on another site.]  The
influenza virus had a profound virulence, with a
mortality rate at 2.5% compared to the previous
influenza epidemics, which were less than 0.1%. The
death rate for 15 to 34-year-olds of influenza and
pneumonia were 20 times higher in 1918 than in
previous years (Taubenberger). People were struck with
illness on the street and died rapid deaths. One
anectode shared of 1918 was of four women playing
bridge together late into the night. Overnight, three
of the women died from influenza (Hoagg)...
"...With one-quarter of the US and one-fifth of the
world infected with the influenza, it was impossible
to escape from the illness. Even President Woodrow
Wilson suffered from the flu in early 1919 while
negotiating the crucial treaty of Versailles to end
the World War (Tice)..."

>From the CDC [detailed article; has links to most of
the footnoted articles, also lots of graphs]:
http://www.cdc.gov/ncidod/eid/vol12no01/05-0979.htm
"...An estimated one third of the world's population
(or &#8776;500 million persons) were infected and had
clinically apparent illnesses (1,2) during the
1918–1919 influenza pandemic. The disease was
exceptionally severe. Case-fatality rates were >2.5%,
compared to <0.1% in other influenza pandemics (3,4).
Total deaths were estimated at &#8776;50 million (5–7)
and were arguably as high as 100 million (7).

The impact of this pandemic was not limited to
1918–1919. All influenza A pandemics since that time,
and indeed almost all cases of influenza A worldwide
(excepting human infections from avian viruses such as
H5N1 and H7N7), have been caused by descendants of the
1918 virus, including "drifted" H1N1 viruses and
reassorted H2N2 and H3N2 viruses. The latter are
composed of key genes from the 1918 virus, updated by
subsequently incorporated avian influenza genes that
code for novel surface proteins, making the 1918 virus
indeed the "mother" of all pandemics...With the
appearance of a new H2N2 pandemic strain in 1957
("Asian flu"), the direct H1N1 viral descendants of
the 1918 pandemic strain disappeared from human
circulation entirely, although the related lineage
persisted enzootically in pigs. But in 1977, human
H1N1 viruses suddenly "reemerged" from a laboratory
freezer (9). They continue to circulate endemically
and epidemically.

Thus in 2006, 2 major descendant lineages of the 1918
H1N1 virus, as well as 2 additional reassortant
lineages, persist naturally: a human epidemic/endemic
H1N1 lineage, a porcine enzootic H1N1 lineage
(so-called classic swine flu), and the reassorted
human H3N2 virus lineage, which like the human H1N1
virus, has led to a porcine H3N2 lineage. None of
these viral descendants, however, approaches the
pathogenicity of the 1918 parent virus..."

> Further, we'd probably lose fewer people now than we
> did then for the same type of pandemic because:
> 
> 1) We have better nutrition and general health.  Few
> are starving in the US.
> 2) We don't have rampant TB.  If you look at the TB
> deaths in the years
> following the flu, they dropped noticeably.  One
> argument was that the flu
> resulted in an "early harvest" of TB deaths of
> people who appeared fairly healthy but had TB.

>From Wiki:
"...In September 2000, Noymer and Garenne published a
study that poses an etiological theory explaining the
unusual W-shaped mortality age profile of the virus.
This profile is characterized by a mode in the 25 – 34
year age group. Usually, influenza has a U-shaped
profile, being most deadly to the young and the old.
Additionally, after the pandemic the difference in
life expectancy between men and women decreased (women
had a historically longer life expectancy). Noymer and
Garenne have causally linked these two anomalies to an
interaction with tuberculosis, a predominantly male
disease of young adulthood..."

> 3) We are much better prepared to fight bacterial
> pneumonia, etc. than we were before 1920.
> 4) We do have some Tamiflu.....by 2008 it will be
> enough to dose an expected 25% infection rate.  

CDC: "...Despite the extraordinary number of global
deaths, most influenza cases in 1918 (>95% in most
locales in industrialized nations) were mild and
essentially indistinguishable from influenza cases
today. Furthermore, laboratory experiments with
recombinant influenza viruses containing genes from
the 1918 virus suggest that the 1918 and 1918-like
viruses would be as sensitive as other typical virus
strains to the Food and Drug Administration–approved
antiinfluenza drugs rimantadine and oseltamivir..."
 
> Given this, it's probable that the death rate from a
> pandemic that's the
> equivalent of the Spanish flu would be lower.  I'd
> guess to the 0.25% level or so.

<grin> Did you peak at this PBS site?
http://www.pbs.org/wnet/secrets/case_killerflu/index.html
"...Flu mortality rates typically linger around 0.1
percent (despite the widespread availability of flu
vaccines and modern antiviral drugs, 36,000 people
still die every year in the United States from
complications of the flu); in the 1918 flu, the rate
was twenty-five times higher, with deaths usually the
result of secondary bacterial pneumonia or
bronchitis..."  [Actually, a large number were
probably killed primarily; very few bacteria will
cause first symptoms -> death in less than 24 hours.]
 
> It's harder to speculate on worse flu's, but if the
> exponential tail rule
> for pandemics works like the symptoms rule (30% get
> sick, 4% get very sick
> but only 0.6% died), then a death rate of >1% would
> require a once in a millennium flu or worse.

Wiki again:
"...In October 2002, the AFIP together with a
microbiologist from the Mount Sinai School of Medicine
in New York started to reconstruct the Spanish Flu. In
an experiment published in October 2002, they created
a virus with two 1918 genes. This virus was much more
deadly to mice than other constructs containing genes
from contemporary influenza virus. The experiments
were conducted under high biosafety conditions at a
laboratory of the US Department of Agriculture in
Athens, Georgia.

The February 6, 2004 edition of Science magazine
reported that two research teams, one led by Sir John
Skehel, director of the National Institute for Medical
Research in London, another by Professor Ian Wilson of
The Scripps Research Institute in San Diego, had
managed to synthesize the hemagglutinin protein
responsible for the 1918 outbreak of Spanish Flu. They
did this by piecing together DNA from a lung sample
from an Inuit woman buried in the Alaskan tundra and a
number of preserved samples from American soldiers of
the First World War. The teams had analyzed the
structure of the gene and discovered how subtle
alterations to the shape of a protein molecule had
allowed it to move from birds to humans with such
devastating effects..."
 
> It doesn't mean that it won't be a problem.  Our
> standards for governmental
> response to a crisis is much higher than it was in
> the early 20th century,
> and I'd expect the response to fall short.  Even if
> we have a US full of New
> Orleans, we should not expect a 1% death rate.

However, this from the CDC is sobering:
"...Even with modern antiviral and antibacterial
drugs, vaccines, and prevention knowledge, the return
of a pandemic virus equivalent in pathogenicity to the
virus of 1918 would likely kill >100 million people
worldwide. A pandemic virus with the (alleged)
pathogenic potential of some recent H5N1 outbreaks
could cause substantially more deaths..."

* 
http://www.cheetah.org/lm_papers/coronavirus.pdf
...Cheetahs are known as the world’s fastest land
animal but also for their extreme genetic uniformity,
a consequence of their escape from extinction some
12,000 years ago. Remarkably, unrelated cheetahs
accept skin grafts from nonrelatives, a characteristic
of highly inbred laboratory strains of mice or rats
[8]. The most likely explanation for the high
mortality in cheetahs is their genetic uniformity,
particularly at immune
genes like the MHC. This may have rendered the species
susceptible to an emerging virulent strain that had
evolved to circumvent the defenses of the first
victim. If this hypothesis is correct, the greater
genetic
diversity of domestic cats and humans may reduce the
severity of the epidemic, and also contribute to the
occurrence of rare genetically determined SARS-CoV
super-spreaders who can infect with high virulence.
This explanation emphasizes the critical role of
intrinsic genomic diversity among immune defense
genes in any fatal epidemic...

**
http://jmg.bmjjournals.com/cgi/content/full/42/3/205
"HIV strains are unable to enter macrophages that
carry the CCR5-{Delta}32 deletion; the average
frequency of this allele is 10% in European
populations. A mathematical model based on the
changing demography of Europe from 1000 to 1800 AD
demonstrates how plague epidemics, 1347 to 1670, could
have provided the selection pressure that raised the
frequency of the mutation to the level seen today. It
is suggested that the original single mutation
appeared over 2500 years ago and that persistent
epidemics of a haemorrhagic fever that struck at the
early classical civilisations served to force up the
frequency to about 5x10–5 at the time of the Black
Death in 1347."

http://www.sbs.utexas.edu/genetics/Fall05/Handouts/TheScientist-Plague-HIV-Resistance-2005.pdf
...Sue Scott and Chris Duncan from the University of
Liverpool have suggested that the bacterium Y.
pestis — held to be the causative organism for bubonic
plague since the 19th century — may not have
been responsible for the epidemic after all. In their
book, 'Biology of Plagues' (Cambridge University
Press, 2001) they proposed that the culprit was most
likely a filovirus, similar to the Ebola virus. This
theory is based on evidence that emerged after sifting
through old parish records of the many towns
affected by the plague and then tracking how the
disease spread throughout Britain and Europe.
So how does this link to increased resistance to HIV?
In a study published in the American Journal of
Human Genetics (Am J Hum Genet 1998, 62:1507-1515)
Stephen O'Brien and colleagues at the US
National Cancer Institute, used coalescence theory to
interpret modern haplotype genealogy. They
found that a genetic mutation that gives its carriers
protection against the HIV virus became relatively
common among white Europeans about 700 years ago — the
same period that the Black Death swept
into Europe. The team also concluded that the
geographic cline of the mutation frequencies and its
recent emergence were consistent with a strongly
selective historic event (such as an epidemic of a
pathogen), driving its frequency upwards in
populations whose ancestors survived the Black Death.
The mutation occurs on the gene for CCR-5, a receptor
on the surface of macrophages. When a person
becomes infected with HIV, the virus latches onto CCR5
and another protein — CD-4 — to be
transported inside the macrophages...

...The Danish group rejected the idea that the
mutation became more prevalent as a result of the
Black
Death because the epidemic began in Sicily (in the
South) and spread north to Scandinavia. This
direction of travel would have predicted that the
prevalence of the mutation would have become higher
in the South than in the North, which is the reverse
of what actually happened.  Assuming that the mutation
arose in Scandinavia, Eugen-Olsen's team concentrated
on determining the time of the major spread of the
mutation by examining bones found in Denmark, dating
from the last Ice Age, around 8000 BC to 1950 BC. In
particular, they focused on the time between 1800 and
2600 BC, a Mesolithic period of massive change and
migration. Their findings suggested that the
CCR-5-&#8710;32 mutation was already highly prevalent
in Denmark before
the Black Death. Rasmussen reported: "There is support
in the fact that the distribution of the Single Grave
Culture in Northern and Middle Europe matches that of
the high prevalence of 32&#8710;." This meant that an
epidemic decimating the Stone Age population could
explain the archaeological observations as well as the
distribution of the 32&#8710; mutation...

Debbi
Whew Boy Maru


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