Andreas Tille pushed to branch master at Debian Blends Team / med
Commits:
3234d96b by Andreas Tille at 2020-07-27T11:17:08+02:00
Avoid duplicated entries if package (like tabix) had different name in older
distributions
- - - - -
f4dbf4e2 by Andreas Tille at 2020-07-27T11:23:29+02:00
Update UDD status
- - - - -
2 changed files:
- covid-19_doc/bio_covid-19_dependencies_query
- covid-19_doc/bio_covid-19_dependencies_result
Changes:
=====================================
covid-19_doc/bio_covid-19_dependencies_query
=====================================
@@ -340,7 +340,8 @@ SELECT co.package, architectures, s.section,
SELECT p.source, p.package, entry FROM registry r
JOIN (SELECT DISTINCT source, package FROM packages WHERE
release in ('sid')) p ON r.source = p.source
WHERE name = 'bio.tools') tmp) bt ON bt.package = co.package
- LEFT OUTER JOIN (SELECT DISTINCT p.package, p.source, s.testsuite FROM
packages p
+ LEFT OUTER JOIN (SELECT DISTINCT p.package, p.source, s.testsuite FROM
+ (SELECT DISTINCT source, package, release FROM packages
WHERE release ='sid') p
LEFT JOIN (SELECT source, testsuite FROM -- avoid
duplicates when having instances with and without testsuite for different
architectures
(SELECT source, testsuite, row_number() OVER (PARTITION
BY source ORDER BY testsuite) FROM sources WHERE release = 'sid' ) tmp
WHERE row_number= 1) s ON p.source = s.source ) t ON
co.package = t.package
=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Fri, 24 Jul 2020 09:46:49 +0200
+Last-Update: Mon, 27 Jul 2020 11:17:44 +0200
package | architectures | section |
releases | conda |
bio.tools | testsuite
------------------------------------+---------------------+----------+-----------------------------------------------------------+----------------------+--------------------+-------------------------------------
@@ -20,7 +20,7 @@ Last-Update: Fri, 24 Jul 2020 09:46:49 +0200
allelecount | amd64,arm64,ppc64el | main |
bullseye,sid |
cancerit-allelecount | | autopkgtest-pkg-perl
python3-anndata | | | new
| anndata |
|
arvados | | |
https://salsa.debian.org/med-team/arvados |
| |
- r-other-ascat | all | main | sid
| ascat |
| autopkgtest-pkg-r
+ r-other-ascat | all | main | sid
| ascat |
|
assembly-stats | amd64,arm64,ppc64el | main |
bullseye,sid | assembly-stats
| | autopkgtest
atropos | amd64,arm64,ppc64el | main |
bullseye,sid | atropos
| atropos |
augustus | amd64,arm64,ppc64el | main |
buster,bullseye,sid | augustus
| AUGUSTUS | autopkgtest
@@ -115,7 +115,7 @@ Last-Update: Fri, 24 Jul 2020 09:46:49 +0200
nanook | all | main |
buster,bullseye,sid |
| NanoOK | autopkgtest
nanoraw | | |
| |
|
nanosv | all | main |
bullseye,sid | nanosv
| |
- python3-ncls | | | new
| |
|
+ python3-ncls | amd64,arm64,ppc64el | main | sid
| |
| autopkgtest-pkg-python
ngmlr | amd64 | main |
bullseye,sid | ngmlr
| | autopkgtest
oncofuse | | |
https://salsa.debian.org/med-team/oncofuse |
| |
openstructure | amd64 | main |
bullseye,sid |
| | autopkgtest
@@ -185,7 +185,6 @@ Last-Update: Fri, 24 Jul 2020 09:46:49 +0200
strelka | | |
https://salsa.debian.org/med-team/strelka | strelka
| |
python3-streamz | all | main |
bullseye,sid |
| | autopkgtest
tabix | amd64,arm64,ppc64el | main |
buster,bullseye,sid | htslib
| | autopkgtest
- tabix | amd64,arm64,ppc64el | main |
buster,bullseye,sid | htslib
| |
tiddit | amd64,arm64,ppc64el | main |
bullseye,sid | tiddit
| | autopkgtest
tombo | amd64,arm64 | main | sid
| ont-tombo |
| autopkgtest
tophat-recondition | all | main |
bullseye,sid |
| |
@@ -214,16 +213,15 @@ Last-Update: Fri, 24 Jul 2020 09:46:49 +0200
tao-json | | |
| |
|
python3-h5py | all | main |
buster,bullseye,sid |
| | autopkgtest
python3-numpy | amd64,arm64,ppc64el | main |
buster,bullseye,sid |
| | autopkgtest
- python3-numpy | amd64,arm64,ppc64el | main |
buster,bullseye,sid |
| | autopkgtest
python3-pandas | all | main |
buster,bullseye,sid |
| | autopkgtest
python3-pyarrow | | |
| |
|
python3-sklearn | all | main |
buster,bullseye,sid |
| | autopkgtest
python3-toolz | all | main |
buster,bullseye,sid |
| | autopkgtest
python3-tornado | amd64,arm64,ppc64el | main |
buster,bullseye,sid |
| | autopkgtest
python3-tqdm | all | main |
buster,bullseye,sid |
| |
- libxenium-dev | | |
| |
|
+ libxenium-dev | all | main | sid
| |
|
xonsh | all | main |
buster,bullseye,sid |
| | autopkgtest
golang-github-shenwei356-xopen-dev | all | main | sid
| |
| autopkgtest-pkg-go
python3-yaml | amd64,arm64,ppc64el | main |
buster,bullseye,sid |
| | autopkgtest
-(223 Zeilen)
+(221 Zeilen)
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/compare/840d5d3eba3b7d2472cdaa3a97b0236a31f54f6d...f4dbf4e256b336bac6aa914d6a255c9ffb945789
--
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/compare/840d5d3eba3b7d2472cdaa3a97b0236a31f54f6d...f4dbf4e256b336bac6aa914d6a255c9ffb945789
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