Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
5d9b02cf by Andreas Tille at 2020-06-26T10:52:26+02:00
Update UDD status

- - - - -


1 changed file:

- covid-19_doc/bio_covid-19_dependencies_result


Changes:

=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Mon, 22 Jun 2020 14:53:02 +0200
+Last-Update: Fri, 26 Jun 2020 10:48:35 +0200
 
         package         |    architectures    | section  |                     
 releases                       |        conda         |   bio.tools   |        
      testsuite              
 
------------------------+---------------------+----------+-----------------------------------------------------+----------------------+---------------+-------------------------------------
@@ -24,7 +24,7 @@ Last-Update: Mon, 22 Jun 2020 14:53:02 +0200
  assembly-stats         | amd64,arm64,ppc64el | main     | bullseye,sid        
                                | assembly-stats       |               | 
autopkgtest
  atropos                | amd64,arm64,ppc64el | main     | bullseye,sid        
                                | atropos              | atropos       | 
  augustus               | amd64,arm64,ppc64el | main     | buster,bullseye,sid 
                                | augustus             | AUGUSTUS      | 
autopkgtest
- bamkit                 | all                 | main     | sid                 
                                |                      |               | 
+ bamkit                 | all                 | main     | bullseye,sid        
                                |                      |               | 
  bandage                | amd64,arm64,ppc64el | main     | buster,bullseye,sid 
                                | bandage              | bandage       | 
  libbbhash-dev          | amd64,arm64,ppc64el | main     | sid                 
                                |                      |               | 
autopkgtest
  bcftools               | amd64,arm64,ppc64el | main     | buster,bullseye,sid 
                                | bcftools             | bcftools      | 
autopkgtest
@@ -97,14 +97,14 @@ Last-Update: Mon, 22 Jun 2020 14:53:02 +0200
  mosdepth               |                     |          | 
https://salsa.debian.org/med-team/mosdepth          | mosdepth             |    
           | 
  multiqc                | all                 | main     | bullseye,sid        
                                | multiqc              | multiqc       | 
  muscle                 | amd64,arm64,ppc64el | main     | buster,bullseye,sid 
                                | muscle               | MUSCLE        | 
autopkgtest
- nanofilt               |                     |          | new                 
                                | nanofilt             |               | 
- nanolyse               |                     |          | 
https://salsa.debian.org/med-team/nanolyse          | nanolyse             |    
           | 
+ nanofilt               | amd64,arm64,ppc64el | main     | bullseye,sid        
                                | nanofilt             |               | 
autopkgtest
+ nanolyse               |                     |          | new                 
                                | nanolyse             |               | 
  python3-nanomath       | all                 | main     | bullseye,sid        
                                |                      |               | 
autopkgtest
  nanoplot               |                     |          | 
https://salsa.debian.org/med-team/nanoplot          | nanoplot             |    
           | 
  nanopolish             | amd64,arm64         | main     | buster,bullseye,sid 
                                | nanopolish           | nanopolish    | 
autopkgtest
  nanook                 | all                 | main     | buster,bullseye,sid 
                                |                      | NanoOK        | 
  nanoraw                |                     |          |                     
                                |                      |               | 
- nanosv                 | all                 | main     | sid                 
                                | nanosv               |               | 
+ nanosv                 | all                 | main     | bullseye,sid        
                                | nanosv               |               | 
  python3-ncls           |                     |          | new                 
                                |                      |               | 
  ngmlr                  |                     |          | new                 
                                | ngmlr                |               | 
  oncofuse               |                     |          | 
https://salsa.debian.org/med-team/oncofuse          |                      |    
           | 
@@ -123,12 +123,12 @@ Last-Update: Mon, 22 Jun 2020 14:53:02 +0200
  porechop               | amd64,arm64,ppc64el | main     | buster,bullseye,sid 
                                | porechop             |               | 
autopkgtest
  porejuicer             |                     |          |                     
                                |                      |               | 
  poretools              | all                 | main     | buster,bullseye,sid 
                                | poretools            |               | 
autopkgtest
- pplacer                |                     |          | 
https://salsa.debian.org/med-team/pplacer           | pplacer              |    
           | 
+ pplacer                |                     |          | new                 
                                | pplacer              |               | 
  presto                 | all                 | main     | bullseye,sid        
                                | presto               | pRESTO        | 
autopkgtest-pkg-python
  prinseq-lite           | all                 | main     | bullseye,sid        
                                |                      |               | 
autopkgtest
  prodigal               | amd64,arm64,ppc64el | main     | buster,bullseye,sid 
                                | prodigal             |               | 
autopkgtest
  pybedtools-bin         | all                 | main     | buster,bullseye,sid 
                                | pybedtools           | pybedtools    | 
autopkgtest-pkg-python
- python3-pychopper      |                     |          | new                 
                                |                      |               | 
+ python3-pychopper      | all                 | main     | sid                 
                                |                      |               | 
autopkgtest-pkg-python
  pycoqc                 | all                 | main     | bullseye,sid        
                                | pycoqc               |               | 
  pyomo                  |                     |          |                     
                                |                      |               | 
  python3-pysam          | amd64,arm64,ppc64el | main     | buster,bullseye,sid 
                                | pysam                | pysam         | 
autopkgtest, autopkgtest-pkg-python
@@ -164,8 +164,8 @@ Last-Update: Mon, 22 Jun 2020 14:53:02 +0200
  streamformatics        |                     |          |                     
                                |                      |               | 
  strelka                |                     |          | 
https://salsa.debian.org/med-team/strelka           | strelka              |    
           | 
  python3-streamz        |                     |          | new                 
                                |                      |               | 
- tiddit                 | amd64,arm64,ppc64el | main     | sid                 
                                | tiddit               |               | 
- tombo                  |                     |          | 
https://salsa.debian.org/med-team/tombo             | ont-tombo            |    
           | 
+ tiddit                 | amd64,arm64,ppc64el | main     | bullseye,sid        
                                | tiddit               |               | 
+ tombo                  |                     |          | new                 
                                | ont-tombo            |               | 
  tophat-recondition     | all                 | main     | bullseye,sid        
                                |                      |               | 
  tornado                |                     |          |                     
                                |                      |               | 
  trim-galore            | all                 | main     | bullseye,sid        
                                | trim-galore          |               | 
autopkgtest
@@ -179,10 +179,10 @@ Last-Update: Mon, 22 Jun 2020 14:53:02 +0200
  ensembl-vep            |                     |          | 
https://salsa.debian.org/med-team/ensembl-vep       | ensembl-vep          |    
           | 
  vg                     | amd64               | main     | bullseye,sid        
                                | vg                   |               | 
autopkgtest
  vienna-rna             |                     |          | 
https://salsa.debian.org/med-team/vienna-rna        |                      |    
           | 
- vsearch                | amd64,ppc64el       | main     | buster,bullseye,sid 
                                | vsearch              | vsearch       | 
+ vsearch                | amd64,ppc64el       | main     | buster,bullseye,sid 
                                | vsearch              | vsearch       | 
autopkgtest
  vt                     |                     |          | new                 
                                | vt                   |               | 
  wham-align             | amd64               | main     | bullseye,sid        
                                | wham                 | wham          | 
autopkgtest
- yanagiba               |                     |          | new                 
                                |                      |               | 
+ yanagiba               | all                 | main     | sid                 
                                |                      |               | 
  yanosim                |                     |          | new                 
                                |                      |               | 
  libatomicbitvector-dev | all                 | main     | bullseye,sid        
                                |                      |               | 
autopkgtest
  python3-h5py           | all                 | main     | buster,bullseye,sid 
                                |                      |               | 
autopkgtest



View it on GitLab: 
https://salsa.debian.org/blends-team/med/-/commit/5d9b02cf7621cefcd107de5ee2c8ff905541ff8b

-- 
View it on GitLab: 
https://salsa.debian.org/blends-team/med/-/commit/5d9b02cf7621cefcd107de5ee2c8ff905541ff8b
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