Andreas Tille pushed to branch master at Debian Blends Team / med
Commits:
3c727fb8 by Andreas Tille at 2020-05-15T22:29:41+02:00
Another status update of Dependencies in Debian
- - - - -
1 changed file:
- covid-19_doc/bio_covid-19_dependencies_result
Changes:
=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Thu, 14 May 2020 08:38:41 +0200
+Last-Update: Fri, 15 May 2020 22:24:02 +0200
package | architectures | section |
releases | conda | bio.tools
-----------------------------+---------------------+----------+---------------------------------------------+--------------------------+--------------
@@ -19,11 +19,11 @@ Last-Update: Thu, 14 May 2020 08:38:41 +0200
drop-seq-tools | | |
| |
fastp | amd64,arm64,ppc64el | main |
buster,bullseye,sid | fastp |
fastqc | all | main |
buster,bullseye,sid | fastqc | FastQC
- filtlong | | |
https://salsa.debian.org/med-team/filtlong | |
+ filtlong | | | new
| |
freebayes | amd64,arm64,ppc64el | main |
buster,bullseye,sid | freebayes |
freebayes
gatk | | |
https://salsa.debian.org/med-team/gatk | |
graphmap2 | | |
https://salsa.debian.org/med-team/graphmap2 | |
- ivar | | |
| |
+ ivar | | | new
| |
kallisto | amd64,arm64,ppc64el | main | bullseye,sid
| kallisto | kallisto
kraken2 | amd64,arm64,ppc64el | main | bullseye,sid
| kraken2 | kraken
libhts-dev | amd64,arm64,ppc64el | main |
buster,bullseye,sid | htslib |
@@ -40,7 +40,7 @@ Last-Update: Thu, 14 May 2020 08:38:41 +0200
ncbi-blast+ | amd64,arm64,ppc64el | main |
buster,bullseye,sid | blast | blast
nextflow | | |
https://salsa.debian.org/med-team/nextflow | |
nf-core | | |
| |
- parallel-fastq-dump | | |
| |
+ parallel-fastq-dump | | | new
| |
picard-tools | amd64 | main |
buster,bullseye,sid | picard |
Picard_tools
porechop | amd64,arm64,ppc64el | main |
buster,bullseye,sid | |
presto | | |
| |
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/commit/3c727fb80a0f23eb2da034ffe6f15a828509ea00
--
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/commit/3c727fb80a0f23eb2da034ffe6f15a828509ea00
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