Andreas Tille pushed to branch master at Debian Blends Team / med
Commits: 61a0b0b4 by Andreas Tille at 2018-08-25T21:29:27Z Do not advertise Python2 version any more if Python3 version exists - - - - - 1 changed file: - tasks/bio-dev Changes: ===================================== tasks/bio-dev ===================================== @@ -226,46 +226,39 @@ Pkg-Description: platform for chemo- and bioinformatics based on Eclipse Recommends: libgff-dev -Recommends: python-pysam +Recommends: python3-pysam Recommends: python-pbcore, python-pbh5tools -Recommends: python-cobra +Recommends: python3-cobra Recommends: libtabixpp-dev -Recommends: python3-ruffus | python-ruffus +Recommends: python3-ruffus -Recommends: python3-hyphy | python-hyphy +Recommends: python3-hyphy -Recommends: python3-dendropy | python-dendropy +Recommends: python3-dendropy Recommends: python3-skbio -Recommends: python3-pbconsensuscore | python-pbconsensuscore +Recommends: python3-pbconsensuscore -Recommends: python3-consensuscore2 | python-consensuscore2, libconsensuscore-dev +Recommends: python3-consensuscore2, libconsensuscore-dev Recommends: python-pbcommand -Recommends: python3-pyvcf | python-pyvcf +Recommends: python3-pyvcf -Recommends: python3-pyfaidx | python-pyfaidx +Recommends: python3-pyfaidx Recommends: python-kineticstools -Recommends: python3-pyfasta | python-pyfasta -Remark: Testsuite uncovers problems and code is not actively maintained - The upstream author of python-pyfasta confirmed that he stopped - the development and recommends python-pyfaidx instead. So the - packaging code for python-pyfasta in SVN works but there is no - intend to really upload the package. - Suggests: libbam-dev Recommends: libqes-dev -Recommends: libfast5-dev, python3-fast5 | python-fast5 +Recommends: libfast5-dev, python3-fast5 Recommends: libpbseq-dev, libpbdata-dev, libpbihdf-dev, libblasr-dev @@ -275,7 +268,7 @@ Recommends: libminimap-dev Recommends: libncl-dev -Recommends: libngs-sdk-dev, libngs-java, python3-ngs | python-ngs, libncbi-vdb-dev +Recommends: libngs-sdk-dev, libngs-java, python3-ngs, libncbi-vdb-dev Recommends: libqcpp-dev @@ -322,8 +315,7 @@ Recommends: python3-pybedtools Recommends: python3-gffutils -Recommends: python3-bx | python-bx -WNPP: 851242 +Recommends: python3-bx Recommends: python-bd2k, toil, galaxy-lib @@ -333,11 +325,11 @@ Recommends: libseqlib-dev Recommends: libroadrunner-dev, python-roadrunner -Recommends: python3-biotools | python-biotools +Recommends: python3-biotools Recommends: bio-tradis -Recommends: python3-biomaj3 | python-biomaj3 +Recommends: python3-biomaj3 Suggests: python-pyflow @@ -345,7 +337,7 @@ Suggests: r-cran-natserv Recommends: libbiod-dev -Recommends: python3-ete3 | python-ete3 +Recommends: python3-ete3 Recommends: python3-gfapy View it on GitLab: https://salsa.debian.org/blends-team/med/commit/61a0b0b4061605f179e11d1c978ff5ef3f60a2ec -- View it on GitLab: https://salsa.debian.org/blends-team/med/commit/61a0b0b4061605f179e11d1c978ff5ef3f60a2ec You're receiving this email because of your account on salsa.debian.org.
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