Dear Colleagues
We have developed a method for predicting "guide strand of microRNAs
from its sequence and secondary structure" it is published in BMC
Bioinformatics see http://www.biomedcentral.com/1471-2105/10/105 .
Though it is developed to discriminate for guide and passenger strand
of miRNA but it can be used to design siRNA. I hope this information
will be useful for bioinformatics community.

With Regards

Raghava
#======================================================
# Dr G P S Raghava FASc, FNASc, Scientist and Head Bioinformatics
Centre       #
# Institute of Microbial Technology, Sector-39A, Chandigarh, India  #
# Phone: +91-172-2690557, Fax: +91-172-2690632
#
# Eadd: http://www.imtech.res.in/raghava/   [email protected] #
#=====================================================

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