Thank you for your quick attention to this matter. I can look into the palamino error if it persists post Bioconductor release (later this week or early next). The error did not prevent the package from being included in this April 16 release.
I am also looking into making the BiocFileCache errors more verbose to aid in debugging instances like this and hope to have it implemented during the next release cycle. Cheers, Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Jean-Philippe Villemin <jpville...@gmail.com> Sent: Monday, April 14, 2025 5:40 PM To: Martin Grigorov <martin.grigo...@gmail.com> Cc: bioc-devel@r-project.org <bioc-devel@r-project.org> Subject: Re: [Bioc-devel] Unexpected Build Failure for BulkSignalR Hi, unfortunately, I think you were pintpointing an older snapshot from Tue, 28 Jan 2025. So to me, it's still in failure whereas the bump version is the same. https://secure-web.cisco.com/1ZseCb2nzF_iDczcxRPT91Fl_DWf5dgKZ7VXu_n3T-HVz6XMa3eYQActN9PlUNh3zMsolVzUVaOaOA6c17alyvNs9FozvJnPiN5nmuCmbKsf9vzsorK3WHKmD9baZzgkYo178nVzFf0FsP1Pxs4lnHrjd2Ec5PM_mXxIDBmQKmDjdSBS6dar2BeOy528spF-gQJGmIuAN9T5oKndSCdBL8hDcQWrbIU2-LnRlmfDfM8brVQVftASzdYQRRbGaAQb1W3yYtfjNi4RjUGqNKWkcyOeqEnj6uJSH7COemnr20PpqcAbIs0N_UFmIitq4gANf/https%3A%2F%2Fbioconductor.org%2Fpackages%2Fdevel%2Fbioc%2Fhtml%2FBulkSignalR.html *Jean-Philippe Villemin *- Bioinformatics, PhD - Precision Imaging as a New Key in Cancer Care (PINKcc Lab) Institut de Recherche en Cancérologie de Montpellier Inserm U1194 *jpville...@gmail.com <jpville...@gmail.com>* Le lun. 14 avr. 2025 à 07:50, Martin Grigorov <martin.grigo...@gmail.com> a écrit : > Hi, > > On Sat, Apr 12, 2025 at 3:21 PM Jean-Philippe Villemin < > jpville...@gmail.com> wrote: > >> Dear Bioconductor team, >> >> We were surprised to see that the build of our package BulkSignalR has >> recently failed, although it was successful in previous snapshots. We >> haven't made any changes to the package since the last successful builds, >> so we're unsure what might be causing the issue. >> >> Interestingly, the build fails only on certain platforms — namely Windows >> Server 2022 and Linux (openEuler 24.03 LTS) / aarch64 — while it completes >> > > Everything is green in the last build - > https://secure-web.cisco.com/1zekcZMxf8CL8H6oGGUYlzP1UcX1dxJtCiIteRNo95nSxpybpURNVx24SEfxFATVvbwGRy8zJzSCLKXz8BR5irEqOz-HprVunIUWcXxynahmKNYVxZaXzAdUGAlHnIQeo5cRwPWJh8GwhJfaUF08sxcN0wgAlram-N2hTEVV_p7EwdM4XuH5SVWdxYdrB8IpQu5YOwgyUNH8UlAWzL-QWNCqWX-G378rUpb9HNQa6HyQLMhQLt9vEZ_LKeU7-VXWDgKRxqxP1rtSte5hfdLmHH_ysqEBv5r6IZjd2-DUBGJuFOuShhUuB9S5UqWoTWygF/https%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.21%2Fbioc-LATEST%2FBulkSignalR%2Fkunpeng2-checksrc.html > I guess it was a temporary failure as Vincent explained. > > Regards, > Martin > > >> successfully(install/build & check) on Linux distributions and macOS. >> >> Would it be possible to access the list or history of build/check results >> across the different time snapshots? Do you keep such logs somewhere that >> we could consult to better understand what might have changed? >> >> As this issue appeared at the very last minute, just before the upcoming >> April 16 release, we would also like to know if there is still a chance >> for >> *BulkSignalR* to be included in the release if the issue is resolved >> quickly. >> >> If not, what happens next? Will the package remain in the *devel* branch >> automatically until the next Bioconductor release in October? >> >> Thank you very much for your help. >> >> -- >> *Jean-Philippe Villemin *- Bioinformatics, PhD - >> >> Precision Imaging as a New Key in Cancer Care (PINKcc Lab) >> >> Institut de Recherche en Cancérologie de Montpellier >> >> Inserm U1194 >> >> >> *jpville...@gmail.com <jpville...@gmail.com>* >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioc-devel@r-project.org mailing list >> https://secure-web.cisco.com/1ZB0Su95Tgl9w44bPNog_vmlij1HiPiazwpMKcJIBFudXMwLotaJCIUlLVIi7ckYwUhd0grD6lRRcrQcHVgb09TOs70v7NLRzIZjuXaWpOnaH1lZJx1rve-rRibjtrI8aOqZDCPLh8Wv6IQY6xs6zopr3Zl591j3_I53cRQmJaH0YdNVCC_X-7lf3GcURLwgfPEsueWkvl2h_Vqebq-ebfPKVgzVXFdtShjtSenaIh-tgl7eD2Ds9la9ChpR2cr-sXNHHeXip1rCjEugZywEMvTzxRT3fw9zB8G2gQ12-PfXQi8LvQM22qarLEFdbJbU1/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel >> > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://secure-web.cisco.com/1ZB0Su95Tgl9w44bPNog_vmlij1HiPiazwpMKcJIBFudXMwLotaJCIUlLVIi7ckYwUhd0grD6lRRcrQcHVgb09TOs70v7NLRzIZjuXaWpOnaH1lZJx1rve-rRibjtrI8aOqZDCPLh8Wv6IQY6xs6zopr3Zl591j3_I53cRQmJaH0YdNVCC_X-7lf3GcURLwgfPEsueWkvl2h_Vqebq-ebfPKVgzVXFdtShjtSenaIh-tgl7eD2Ds9la9ChpR2cr-sXNHHeXip1rCjEugZywEMvTzxRT3fw9zB8G2gQ12-PfXQi8LvQM22qarLEFdbJbU1/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel This email message may contain legally privileged and/or confidential information. 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