Wonderful, thanks for confirming Martin. Best wishes Mike
From: Martin Grigorov <martin.grigo...@gmail.com> Date: Wednesday, 23 October 2024 at 09:42 To: Morgan, Michael <michael.mor...@abdn.ac.uk> Cc: bioc-devel@r-project.org <bioc-devel@r-project.org> Subject: Re: [Bioc-devel] Kunpeng2 compilation error -lopenblas You don't often get email from martin.grigo...@gmail.com. Learn why this is important<https://aka.ms/LearnAboutSenderIdentification> CAUTION: External email. Ensure this message is from a trusted source and exercise caution before clicking links/opening attachments. Hi, This issue has been fixed earlier today. It should be OK in the next build (tomorrow). Regards, Martin On Wed, Oct 23, 2024 at 11:28 AM Morgan, Michael via Bioc-devel <bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>> wrote: Hi Bioc team, I’m the maintainer of miloR. I have a build compilation error on kunpeng2 on Bioc 3.20 related to missing openblas: g++ -std=gnu++17 -shared -L/home/biocbuild/R/R-4.4.1/lib -L/usr/local/lib -o miloR.so RcppExports.o computeMatrices.o fitGeneticPLGlmm.o fitPLGlmm.o inference.o invertPseudoVar.o multiP.o paramEst.o pseudovarPartial.o solveQP.o utils.o -lopenblas -L/usr/lib/gcc/aarch64-linux-gnu/10.3.1 -lgfortran -lm -fopenmp -L/home/biocbuild/R/R-4.4.1/lib -lR /home/biocbuild/miniforge3/bin/../lib/gcc/aarch64-conda-linux-gnu/14.2.0/../../../../aarch64-conda-linux-gnu/bin/ld: cannot find -lopenblas: No such file or directory collect2: error: ld returned 1 exit status make: *** [/home/biocbuild/R/R-4.4.1/share/make/shlib.mk:10<http://shlib.mk:10/>: miloR.so] Error 1 ERROR: compilation failed for package ‘miloR’ This error doesn’t come up on the other linux build servers, MacOS or Windows. Is this an issue with the configuration of the build server, or with the openEuler distro? Thanks for your help. Mike Morgan Pronouns: He/Him Lecturer 6.17, Institute of Medical Sciences School of Medicine, Medical Sciences & Nutrition University of Aberdeen Foresterhill Aberdeen AB25 2ZD Tel: 01224 437397 Web: https://www.morganlab.co.uk/ The University of Aberdeen is a charity registered in Scotland, No SC013683. Tha Oilthigh Obar Dheathain na charthannas clàraichte ann an Alba, Àir. SC013683. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel The University of Aberdeen is a charity registered in Scotland, No SC013683. Tha Oilthigh Obar Dheathain na charthannas clàraichte ann an Alba, Àir. SC013683. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
