Hi Pedro,
I don't see these issues on today's build report, so they may have been
resolved. If you see the issue again, let us know.
Jennifer Wokaty (they/them)
Waldron Lab at CUNY SPS
Bioconductor Core Team
________________________________
From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Pedro Madrigal
<pmadri...@ebi.ac.uk>
Sent: Friday, November 25, 2022 4:09 PM
To: bioc-devel@r-project.org <bioc-devel@r-project.org>
Subject: [Bioc-devel] Failed to locate 'texi2pdf' - Windows build error
***ATTENTION: This email came from an external source. Do not open attachments
or click on links from unknown senders or unexpected emails.***
Dear Bioc-Devel
I have a couple of packages (CexoR, fCCAC) failing the Windows-build due to
Warning in system(paste(shQuote(texi2dvi), "--version"), intern = TRUE) :
running command '"C:\PROGRA~1\MiKTeX\miktex\bin\x64\texify.exe" --version'
had status 1033
Warning in system(paste(shQuote(texi2dvi), if (quiet) "--quiet" else "", :
running command '"C:\PROGRA~1\MiKTeX\miktex\bin\x64\texify.exe" --quiet --pdf
"CexoR.tex" ' had status 1033
Error: processing vignette 'CexoR.Rnw' failed with diagnostics:
Failed to locate 'texi2pdf' output file 'CexoR.pdf' for vignette with name
'CexoR' and engine 'utils::Sweave'. The following files exist in working
directory
'F:\biocbuild\bbs-3.16-bioc\tmpdir\Rtmpkf5YYz\Rbuild42143e2f6b79\CexoR\vignettes':
'CexoR.Rnw' (6938 bytes), 'CexoR.tex' (14846 bytes)
--- failed re-building 'CexoR.Rnw'
I think this is happening in other packages as well. Could please provide
advice?
Best wishes,
Pedro
--
Dr Pedro Madrigal
Senior Bioinformatician, Gene Expression Team
European Bioinformatics Institute (EMBL-EBI)
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Hinxton, Cambridge
CB10 1SD, United Kingdom
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