Thanks Hervé. On Tue 16 Nov 21 11:34, Hervé Pagès wrote: > Salut Pierrick, > > Please give it one more week. We updated R to 4.1.2 on the release build > machines last week and riesling1 was the last one to receive the update. For > riesling1 this update was actually made only a few hours before the Long > Tests builds, with the unfortunate consequence that not all deps got a > chance to get installed on the machine before those builds started. > > This is just bad timing and I'm sorry for the inconvenience. > > Cheers, > H. > > > On 14/11/2021 23:03, Pierrick Roger wrote: > > Hi, > > > > The long tests of all my packages (biodb, biodbChebi, biodbHmdb, > > BiodbKegg, biodbLipidmaps, biodbUniprot) are failing on Windows platform > > (riesling1). > > > > Here is the error for `biodb`: > > ``` > > * checking package dependencies ... ERROR > > Packages required but not available: > > 'BiocFileCache', 'R6', 'RSQLite', 'Rcpp', 'XML', 'chk', 'jsonlite', > > 'lgr', 'lifecycle', 'openssl', 'plyr', 'progress', 'rappdirs', > > 'stringr', 'withr', 'yaml', 'testthat' > > > > Packages suggested but not available: > > 'BiocStyle', 'roxygen2', 'devtools', 'knitr', 'rmarkdown', 'covr', > > 'xml2', 'git2r' > > ``` > > > > See the following pages: > > * > > http://bioconductor.org/checkResults/release/bioc-longtests-LATEST/biodb/ > > * > > http://bioconductor.org/checkResults/release/bioc-longtests-LATEST/biodbHmdb/ > > * > > http://bioconductor.org/checkResults/release/bioc-longtests-LATEST/biodbChebi/ > > * > > http://bioconductor.org/checkResults/release/bioc-longtests-LATEST/biodbKegg/ > > * > > http://bioconductor.org/checkResults/release/bioc-longtests-LATEST/biodbUniprot/ > > * > > http://bioconductor.org/checkResults/release/bioc-longtests-LATEST/biodbLipidmaps/ > > > > Does anyone have an idea of what is happening? > > > > -- > Hervé Pagès > > Bioconductor Core Team > hpages.on.git...@gmail.com
-- Research engineer Pierrick Roger http://www.cea-tech.fr | http://workflow4metabolomics.org | http://www.metabohub.fr https://fr.linkedin.com/in/pkrog | https://github.com/pkrog In varietate concordia. _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
