Dear Marcel,
I have updated BiocCheck to version 1.29.16, but the error persists. Here
my lines of code that are causing this issue, in red the lines indicated by
BiocCheck:
dropdownMenu(type="tasks",
icon=icon("info"),
badgeStatus=NULL,
headerText="Check out",
notificationItem(
text="InterCellar",
icon=icon("github"),
status="primary",
href="
https://github.com/martaint/InterCellar";
),
notificationItem(
text="InterCellar-reproducibility",
icon=icon("github"),
status="primary",
href="
https://github.com/martaint/InterCellar-reproducibility";
),
notificationItem(
text="Bioconductor
package",
icon=icon("cube"),
status="primary",
href="
https://bioconductor.org/packages/InterCellar/";
)
These are part of the app UI.
Thank you very much for taking a look at this!
Best regards,
Marta
On Fri, 15 Oct 2021 at 00:47, Marcel Ramos <ma40...@roswellpark.org> wrote:
> Hi Marta,
>
> Thank you for bringing this to our attention.
> We've made an update to BiocCheck to minimize these false positives.
> Please use BiocCheck version >= 1.29.16 which should propagate in a
> day or so.
>
> Best regards,
>
> Marcel
>
> On 10/14/21 10:39 AM, Marta Interlandi wrote:
> > Hi everybody,
> >
> > My package *InterCellar *is currently getting the error "Avoid references
> > to external hosting platforms" when running BiocCheck.
> > The error is caused by href items pointing towards the github repos of
> the
> > package itself, in the form of clickable links (the package is a Shiny
> app).
> > These 3 links however are not used to get any data, but are simply nice
> > features for the shiny app users.
> >
> > Do you have any suggestions on how I could still include these links
> > without getting an error?
> >
> > Thank you so much for your help!!
> >
> > Best regards,
> >
> > Marta
> >
> > [[alternative HTML version deleted]]
> >
> > _______________________________________________
> > Bioc-devel@r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/bioc-devel
>
> Marcel Ramos
> Bioconductor Core Team
> Roswell Park Comprehensive Cancer Care
> Dept. of Biostatistics & Bioinformatics
> Elm & Carlton Streets
> Buffalo, New York 14263
>
>
>
> This email message may contain legally privileged and/or...{{dropped:2}}
>
> _______________________________________________
> Bioc-devel@r-project.org mailing list
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>
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