Hello everyone, I encountered a problem with two of my Bioconductor packages built on the windows server for the next release. Specifically, it couldn't locate any version of JAGS version 4. Has anyone experienced the same issue with importing or depending on rjags? Thank you!
** using staged installation ** libs "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"D:/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'D:/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c EMalgorithm.cpp -o EMalgorithm.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"D:/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'D:/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"D:/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'D:/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c checkBoundary.cpp -o checkBoundary.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"D:/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'D:/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c convertFromToVector.cpp -o convertFromToVector.o C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o HiLDA.dll tmp.def EMalgorithm.o RcppExports.o checkBoundary.o convertFromToVector.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.14-bioc/R/bin/i386 -lR installing to D:/biocbuild/bbs-3.14-bioc/meat/HiLDA.buildbin-libdir/00LOCK-HiLDA/00new/HiLDA/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading Error: .onLoad failed in loadNamespace() for 'rjags', details: call: fun(libname, pkgname) error: Failed to locate any version of JAGS version 4 The rjags package is just an interface to the JAGS library Make sure you have installed JAGS-4.x.y.exe (for any x >=0, y>=0) fromhttp://www.sourceforge.net/projects/mcmc-jags/files Execution halted ERROR: lazy loading failed for package 'HiLDA' * removing 'D:/biocbuild/bbs-3.14-bioc/meat/HiLDA.buildbin-libdir/HiLDA' Regards, Zhi Yang [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
