Dear Lori, It is not strictly the update, as software package newer went through moderation stage due to problems with large database file. We've split the original package into software and data part, and now the data part is under review, but I would not call what happened to the software package as an update :) as it was newer accepted.
Cheers, Anatoly Cheers, On Mon, Sep 27, 2021 at 11:12 PM Kern, Lori <lori.sheph...@roswellpark.org> wrote: > Ah okay. So this is an update to an existing software package to include > the dependency on the new experiment data package. Sorry I missed that > part in the original email. I would just wait until the data package > makes it through the review. In the future I would wait to make changes to > the software package until the data package was accepted. > > Cheers > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Comprehensive Cancer Center > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > ------------------------------ > *From:* Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of > Anatoly Sorokin <lpto...@gmail.com> > *Sent:* Monday, September 27, 2021 5:52 AM > *To:* bioc-devel@r-project.org <bioc-devel@r-project.org> > *Subject:* Re: [Bioc-devel] Dependence from another New package > > Dear Lori, thank you! > > I have additional question: our software package is already in the > bioconductor git, should I add the original github or bioconductor git to > the AdditionalPackage line to get another package added to the review? > > Thank you, > Anatoly > > On Mon, Sep 27, 2021 at 12:26 PM Kern, Lori <lori.sheph...@roswellpark.org > > > wrote: > > > > https://secure-web.cisco.com/1ow-ZDhZ0NTF2PfdRSLQuskm2EA4UHdXlwovzapeXoTOWEzcC-nl0v9wpRPOFKLYduwBFLRlJ4GXsyIVbomFztWS8Nfrcn2x2KMyIDoAmyVUaDYn8Vr3Epdwcuylp2aH9e93s2nYrjmxWIZ1SXnYv28xwk57bE9X1wzSRA7Sdg5KNIgSeEjvZ5KCS70X2GFoSCWR43tSRh2DZ4nIijL9bLtnMQP_hk72VkBD_Cw8pWvSzo_8qvlhBcS6s4IufZiuR0uKcTZ7rsmVVXeoP2CRlLr8Krp1Nmbtv4mgwPavebSIYdrKmNlEsIsALUfXjMeRv/https%3A%2F%2Fgithub.com%2FBioconductor%2FContributions%23submitting-related-packages > > > > In the documentation there is a way to submit related packages under the > > same review. If they are submitted under the same issue they can be found > > and reviewed together > > > > Get Outlook for iOS < > https://secure-web.cisco.com/1V9yG0vYO9YdaYbIo5AbK8-ROWQ2XFAY4lkNFl5Kv3B4EZk9Y_ZiYjiDXzm7ktF382AXnOhqxzjrsKm4yu9zuNeJUHkmY2BKWvB5SMDZJOtgP4Fc7fsLM_BQqaxrQWOat-9nikhPY6swF0ziWp74RC2u6hQE35dwtID9CNkfWk7yVIcTLpUDgoah_ojEdn1lAepS5jlYJvIGYtpti1PiYxoIzx6qES3BmTe6sS1AzNcmOZn0HmTY8PeGV_DQUYU7QD82KNCQJaTKFXYzKe_nllnQibScf4TQlPm016hjGRkY_oo5kxGktH3UypVpd2i44/https%3A%2F%2Faka.ms%2Fo0ukef > > > > ------------------------------ > > *From:* Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of > > Anatoly Sorokin <lpto...@gmail.com> > > *Sent:* Sunday, September 26, 2021 7:59:17 PM > > *To:* bioc-devel@r-project.org <bioc-devel@r-project.org> > > *Subject:* [Bioc-devel] Dependence from another New package > > > > Hi, > > We have submitted package, that required large data. According to > > suggestion from bioconductor team, we split the package into two parts, > > first of which was recently become available on AnnotationHub. > > Once the data package was on the hub, I've submitted the new version of > the > > software package to the git, but validation had failed due to missing > data > > package, as it is under review at the moment and not available for on > > bioconductor yet. > > Could any one suggest how to resolve this issue, when two packages under > > review simultaneously? > > > > Thank you in advance, > > Anatoly > > > > [[alternative HTML version deleted]] > > > > _______________________________________________ > > Bioc-devel@r-project.org mailing list > > > > > https://secure-web.cisco.com/1M5jbI1SKUmqRjwEcfvUWB6JZePhaUw1nbM0vVXZV0hZYwgOItbTfNqOR8sa2Cv7GTMkEIWc2vfHa8r8N59UCCWKettR1eIYmSZ4yNSQXxPXeR7jN1yvCyzgyXtMUjyEsyI8W_uXRL7Nm35peDJpVPPy_8Gh9G-RYcCKfgOlVtQy0pjmorfCQsApShSYNHJX5szL7KSekaSpJPGHWYn8ZYwCy6VDIV8OWADq3aw55O5vhBgbq5HVSF5cfCjDbUBW3FdwUwFOQ5tvISsJI9tAp1lhS7paPsH9drmNCBuII06DKQTRVnEM4bLI0k4X35QLN/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel > > > > > > This email message may contain legally privileged and/or confidential > > information. 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Thank you. > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > > https://secure-web.cisco.com/1dYbIHEx_15uupTD3HODYP5CyCEp9hvRZoQ8EfxNAcrOl_1teX8B7M_5hEW3iJHWT7ZqomrPNF3nGD9b554jsOtxn21ug58REcjJlehRpkIQy_pFlzDrIrcXuPp91Gb2WiBQCwOvXVEqcw1lJD-IctStJHiqemHtrPeMMKb4AKgY_YDl4X2Gehovq7FeNXI9VUIqrix8svS81gAo1PfPH8-wxOM25R8FWaTt0s1kdFKEVeNb6-UV23qdYAlYuwGAS_tDVSHcsAz6baTZTKK7TBMKKpN764dIiTVHmQvtnWEgN_PQMsRdQ2J32PA21bJrn/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel > > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
