Yes just making the change on the devel branch is fine. Thank you.
Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Yang,Peng <pya...@mdanderson.org> Sent: Tuesday, August 10, 2021 4:12 PM To: Kern, Lori <lori.sheph...@roswellpark.org> Cc: Cao,Shaolong <s...@mdanderson.org>; bioc-devel@r-project.org <bioc-devel@r-project.org> Subject: Re: [EXT] Bioconductor package DeMixT Hi Lori, Thank you very much for noticing us. I have added the �rmarkdown� as the dependency package and pushed it into devel brunch with a version bump. I saw there is no error appears on release brunch, so may I double check all we need to do is correct the error messege in devel brunch? Thanks, Peng From: "Kern, Lori" <lori.sheph...@roswellpark.org> Date: Tuesday, July 27, 2021 at 12:07 PM To: "Cao,Shaolong" <s...@mdanderson.org>, "Yang,Peng" <pya...@mdanderson.org> Subject: [EXT] Bioconductor package DeMixT WARNING: This email originated from outside of MD Anderson. Please validate the sender's email address before clicking on links or attachments as they may not be safe. Hello Package Maintainer, We would like to inform you your package is failing on the devel builders of Bioconductor bioconductor.org/checkResults/devel/bioc-LATEST/ The ERROR is the result of a change in knitr as announced on the mailing list back in June. https://stat.ethz.ch/pipermail/bioc-devel/2021-June/018223.html<https://secure-web.cisco.com/1b43fILhvRYcx3Q33BisdWvLv6MpBJ1cuEZ63MaKf0ZVz6d3v5sSZtnhaMoGVfArmgXy2vO2Ni0kX2io0xGjcE2nOTOeVNN7_221k11m3Sb96GdreUchK6dY8ZbBJ4jpL7yR3azHiBlxqwDGckzH9KjuDw2lRnmPFxP7ssyqUfbAipgqrMhkEQW21qpPmisoMFafNYnJYrjwfsGmNkgKd6l2uYi2mizqTdTghOrtkTajIttnQWsSQO1oixFC9RaSSz_pA2K_JmLBghviTewLztCCBolZViZfEZa6kIORGtJ577x4bJbmv4QJZkwNulq21/https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2Fstat.ethz.ch%2Fpipermail%2Fbioc-devel%2F2021-June%2F018223.html__%3B%21%21PfbeBCCAmug%21yd_pRRmDghsCKTQjIQbkSlzvM2GRtF4X0m2fDfdDUEYKoTYQStDCsb85pKW8ch_i7Q%24> The ERROR is real and needs to be corrected. Please see the build report for your package as the ERROR produced provides explicit instructions for how to fix. Please remember to always do a version bump in the DESCRIPTION when making changes to your package and to push to git.bioconductor.org. If the ERROR is not corrected in the next month we will deprecate your package until the ERROR is resolved with the intention of removing the package in the next release if the package remains broken. We appreciate your quick attention to this matter. If you have further questions or concerns please ask at bioc-devel@r-project.org Cheers Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. The information contained in this e-mail message may be ...{{dropped:22}}
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