Hi, Huang. It looks like you might need to add the rmarkdown package in Suggests (and version bump to catch the change):
http://bioconductor.org/checkResults/devel/bioc-LATEST/ANCOMBC/nebbiolo2-buildsrc.html Since the windows binary version is building, I'm guessing that may fix the issue. Sean On Sun, Aug 8, 2021 at 7:27 AM Lin, Huang <hu...@pitt.edu> wrote: > Dear Bioconductor Core Team, > > I have pushed a commit to g...@git.bioconductor.org: > packages/ANCOMBC.git<mailto:g...@git.bioconductor.org:packages/ANCOMBC.git> > to primarily address the issue brought up in the following email three days > ago; however, the latest changes have not yet been propagated. I understand > it might take up to 48 hours to reflect the latest changes, but given that > it exceeds the general time length, I was wondering whether there is any > problem of my latest push? > > I greatly appreciate your time and help! > > Thank you, > Huang > > From: Kern, Lori <lori.sheph...@roswellpark.org> > Date: Wednesday, July 28, 2021 at 12:53 AM > To: Lin, Huang <hu...@pitt.edu> > Subject: Biconductor package ANCOMBC > Hello Package Maintainer, > > We would like to inform you your package is failing on the devel builders > of > Bioconductor > > bioconductor.org/checkResults/devel/bioc-LATEST/ANCOMBC > > The ERROR is the result of a change in knitr as announced on the mailing > list > back in June. > https://stat.ethz.ch/pipermail/bioc-devel/2021-June/018223.html > > The ERROR is real and needs to be corrected. Please see the build report > for your > package as the ERROR produced provides explicit instructions for how to > fix. Please remember to always do a version bump in the DESCRIPTION when > making > changes to your package and to push to git.bioconductor.org. > > If the ERROR is not corrected in the next month we will deprecate your > package > until the ERROR is resolved with the intention of removing the package in > the > next release if the package remains broken. > > We appreciate your quick attention to this matter. If you have further > questions > or concerns please ask at bioc-devel@r-project.org > > Cheers > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Comprehensive Cancer Center > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
