Thank you for your support. I have confirmed that the MSEADbi devel library() message shows "it is deprecated and AHPathBankDbs is the replacement". https://www.bioconductor.org/packages/devel/bioc/vignettes/MSEADbi/inst/doc/MSEADbi.html#makemseapackage
Regards, Kozo -- Kozo Nishida knish...@riken.jp Laboratory for Biologically Inspired Computing 6-2-3, Furuedai, Suita, Osaka 565-0874, JAPAN RIKEN Center for Biosystems Dynamics Research On Fri, Feb 26, 2021 at 7:16 AM Kern, Lori <lori.sheph...@roswellpark.org> wrote: > > Thank you for letting us know. I will begin the deprecation process for the > package. > > Cheers > > Get Outlook for iOS > ________________________________ > From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Kozo Nishida > <kozo.nish...@gmail.com> > Sent: Thursday, February 25, 2021 5:00:18 PM > To: bioc-devel@r-project.org <bioc-devel@r-project.org> > Subject: [Bioc-devel] What should I do if I need to ask my package to be > deprecated? > > Hello, > > Can I ask my package MSEADbi to be deprecated? > https://secure-web.cisco.com/1k5L1s41pbEp75fIRd4yxYx_PXFvf0mnOmvT3o9wrlyM2u5K44MTwvZGR0ecC7aq0qlIhu2AOJZyW4xgaE8jQnyQFkVh_kJsvSxYvel4QuHY523awMKvXW6CCCo8nBb9fq_MYZlzjRlk6SK92nT_HB7FjV8XW_dhTSBVr-DMOa09kbkuF8-DpnsC98vX0m3ayjN9RQE7996hI5PD4Bvx8IhqzOL3N269jq5Bp1Z1IeaiFrRsAfaMnEMJLHkG1be7quWjcFCY6al6VYsPY5nqvK3M7QezQVHaf1Mpvj-ynzXbmjBGXLApvVDT9y1SZ84Wa/https%3A%2F%2Fbioconductor.org%2Fpackages%2Frelease%2Fbioc%2Fhtml%2FMSEADbi.html > > I have developed an alternative (AnnotationHub) package to MSEADbi > (called AHPathbankDbs > https://secure-web.cisco.com/1ZVXn-bPXajcvw-mLAqfJ-0ANAP2YqH2SByLRfbYC_R26MiFH9X5qZZOdIQEiTD8NgdStmAZI-b4r1H4hikpzJ3LOdqJzn1VzLplVuSh7aytveMf3wqkrPHO4_ADXEQRk477wrwYopoaagBJRvBS-E2t89EEW5vUKL17VPRY8lIwjOQunZ0X9N7v1pmSyT0iLovKRbFWH8mYTJ1z8X0vbV97D5dMFYwYxw61J-fYMBaiFjBz8is-OrnN78jO202GmKTer1Bls-Ee_DTf9ICQlVFEL6qsXEgiMeoK0AdVl4JUvX9ao7tnkuh5oTT8ZuBZ8/https%3A%2F%2Fgithub.com%2FBioconductor%2FContributions%2Fissues%2F1825 > ) > So the MSEADbi package will not be maintained. > > MSEADbi is not AnnotationHub package and the implementation style > is not up to date. > I was unaware of the existence of the AnnotationHub package > when I developed MSEADbi. > > What kind of procedure should I take in such a case? > > > Thanks, > Kozo Nishida > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://secure-web.cisco.com/1MVEj7ecvVIN7LSBBcKQ9Qan9XkOy4-14NEAP_JD_Fx6A-fwTkmqiWtYmreTNIzD9CjhacZjXAqz90SHDdslJl4eoQfVUwEa2X_UCH4NZxPoGW2H4xtJCSyirWuU_vuci2fdYHykiGU4Oezp-Y_DNqSCr_PoWtVJ7xB3fieSxvMJ025fEEap2gBe9CdiKc5kFs9PF6HBbneDQlKJOhrXvIPZB5CqTGFHNNOvwG0VVP6FUY5DjOZUM2V5bRzNzx65S2UVBsgPwyVL9D9RCOM8PIB7nYDOxBFix6bnSO-jlNqYjykyJOefyVUp5KcXr4rDO/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel > > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
