Hello,
I’m running the following Github R-CMD-check workflow file on my package
repository.
https://github.com/r-lib/actions/tree/master/examples#standard-ci-workflow
It passes on 3/4 operating systems — windows-latest (release), macOS-latest
(release), ubuntu-20.04 (devel) — but fails on ubuntu-20.04 (release).
I get the following error at the ‘Install dependencies’ section:
* installing *source* package ‘RCy3’ ... ** using staged installation ** R **
inst ** byte-compile and prepare package for lazy loading Error in
dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object
'/home/runner/work/_temp/Library/igraph/libs/igraph.so': libglpk.so.40: cannot
open shared object file: No such file or directory Calls: <Anonymous> ...
asNamespace -> loadNamespace -> library.dynam -> dyn.load Execution halted
ERROR: lazy loading failed for package ‘RCy3’ * removing
‘/home/runner/work/_temp/Library/RCy3’
Then this error during ‘Check’:
Run options(crayon.enabled = TRUE) ── R CMD build
───────────────────────────────────────────────────────────────── * checking
for file ‘/home/runner/work/FEDUP/FEDUP/DESCRIPTION’ ... OK * preparing
‘FEDUP’: * checking DESCRIPTION meta-information ... OK * installing the
package to build vignettes ----------------------------------- ERROR:
dependency ‘RCy3’ is not available for package ‘FEDUP’ * removing
‘/tmp/RtmpQdTGMd/Rinst3f8b26ef4bf5/FEDUP’ -----------------------------------
ERROR: package installation failed Error: Error in proc$get_built_file() :
Build process failed Calls: <Anonymous> ... build_package -> with_envvar ->
force -> <Anonymous> Execution halted Error: Process completed with exit code 1.
I run into no issues when running devtools::check() locally on my system (macOS
Big Sur 11.2).
Any ideas on how to fix this issue?
Thanks,
Catherine
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