Dear Bioconductor team,
I got a TIMEOUT tag on my package (ChromSCape) because test checks were too long: * checking tests ... Running testthat.R ERROR TIMEOUT: R CMD check exceeded 14 mins Therefore, I followed documentation to transfer part of my tests to long tests (https://bioconductor.org/developers/how-to/long-tests/). I created longtests directory + added a .BBSoptions file with 'RunLongTests: TRUE' , moved my long tests to the longtests directory and pushed with a version bump. The only tests left on the 'tests' directory run in 150 sec on my personal Linux (running devtools::test()). However, after the push, the R CMD CHECK still timed out and the testing running time was exactly the same as before I removed the tests. See (http://bioconductor.org/spb_reports/ChromSCape_buildreport_20200928090448.html). It seems that the checks are still done on the scripts in longtests directory. Do you have any insights on what I should do to actually make them long tests and not timeout ? Github page : https://github.com/vallotlab/ChromSCape Thank you in advance, Pac�me PS: the R CMD check commands actually outputs: Found the following hidden files and directories: .BBSoptions These were most likely included in error. See section Package --- Pac�me Prompsy Bioinformatician - DEpiC Dynamics of epigenetic plasticity in cancer <https://science.institut-curie.org/team-vallot/>https://github.com/vallotlab/scChIPseq D�partement du Transfert/UMR3244 Institut Curie 26 rue d'Ulm 75248 Paris Cedex 5 [[alternative HTML version deleted]]
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