Hi Quy,
Are you looking at the right place? Build report for BioC 3.11 is here
https://bioconductor.org/checkResults/3.11/bioc-LATEST/
and I see PERFect there, since at least Monday.
Best,
H.
On 4/29/20 08:01, Cao, Quy wrote:
Dear Lori,
I haven't seen a build report for the package yet. Should I be waiting for a
little bit more?
Thanks,
Quy
From: Shepherd, Lori <lori.sheph...@roswellpark.org>
Sent: Monday, April 27, 2020 11:00 AM
To: Cao, Quy <quy....@umconnect.umt.edu>; Nitesh Turaga <nturaga.b...@gmail.com>;
Bioc-devel <bioc-devel@r-project.org>
Subject: Re: No build report
It looks like you had merge conflicts with the version bump to 1.1.1 until
late Sat night:
commit 199ad444e10c81c472deefe5dff5e32dff977b41
Author: Quy Xuan Cao <quy....@umontana.edu<mailto:quy....@umontana.edu>>
Date: Sat Apr 25 23:33:03 2020 -0400
Bump up to version 1.1.1 on github
This would be too late to be picked up on Sunday's build report but should be
reflected in today's (normally posted sometime between 3-5PM EST). If it isn't
reflected in today's report, We (the core team) are doing the freeze and bump
and branch for the RELEASE_3_11 and it should resolve itself after that.
Cheers,
Lori Shepherd
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
________________________________
From: Bioc-devel
<bioc-devel-boun...@r-project.org<mailto:bioc-devel-boun...@r-project.org>> on behalf of
Cao, Quy <quy....@umconnect.umt.edu<mailto:quy....@umconnect.umt.edu>>
Sent: Monday, April 27, 2020 10:15 AM
To: Nitesh Turaga <nturaga.b...@gmail.com<mailto:nturaga.b...@gmail.com>>; Bioc-devel
<bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>>
Subject: [Bioc-devel] No build report
Dear all,
I have pushed my updated package PERFect to Bioconductor last weekend but I
haven't seen any build report yet. Is there something I can do in this
situation?
Thanks,
Quy
-----Original Message-----
From: Bioc-devel
<bioc-devel-boun...@r-project.org<mailto:bioc-devel-boun...@r-project.org>> On
Behalf Of Nitesh Turaga
Sent: Monday, April 27, 2020 9:00 AM
To: Leonardo Collado Torres <lcollado...@gmail.com<mailto:lcollado...@gmail.com>>;
Bioc-devel <bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>>
Cc: Carmina Barberena Jonas <car.bar...@gmail.com<mailto:car.bar...@gmail.com>>
Subject: Re: [Bioc-devel] regutools: request to add more git push access
Hi Leo,
I've added you and Alejandro to the regutools package.
Carmina and Emiliano, please confirm the email addresses you'll be using. I can
add you both as well, and create BiocCredentials accounts for you.
Nitesh
On 4/26/2020 11:42 PM, Leonardo Collado Torres wrote:
Hi Nitesh,
Could you add me (l.collado-torres) and Alejandro Reyes (what's your
svn username Alejandro?) to regutools' list of contributors that have
git push access? I think this is what we are supposed to do from
re-reading
https://urldefense.proofpoint.com/v2/url?u=https-3A__secure-2Dweb.cisco.com_1ss3pRMDsJo76mWIsyzXe9lDXoItH2sFabu1CE0znVtuQca1EmsAJSreHomRLs6G6xn-5FgOm6dFEx0dX7CnDzGwE4-5FuklxxTxCsGVOB-5FKCeo13s4UraPVR7afmm8-5FrnmkVrEWTGiTb3jvNrN-5FQDpXBQaMnWw2ymPtot2vNWY5mQp3d5vGiB0NhIRQnxoz7znJB70m6qEvbzJu1oIbjW5EkXrqiXt8ED0uwY1-2Db-5FL9vGSG6xw1MD3dFa2e6DuqHVr1fhCs4SFAGup5Ih2Ns9dFNEsoptDSjsEznRqTC8DIP4FHujFuZGPlFEcQXq37L-5FuE3-5FFlIEFSaT4zaqdX3r-5FcPnQ_https-253A-252F-252Fgithub.com-252FBioconductor-252FContributions-252Fissues-252F1393-2523issuecomment-2D597202057&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=8FW13IFEzMh6ofnZWE-pQBRqriZB_wUdNPOJFK6VqjQ&s=HWm6YBMuhNa8NWPpCStnczlVUMxptH24b7uGVReCzzg&e=
.
Carmina & Emiliano might want git push access too, but they do not
have BioC git accounts as far as I know.
Anyway, for now, I just wanted to add two commits already on GitHub
and push them to BioC's git repo following
https://urldefense.proofpoint.com/v2/url?u=http-3A__secure-2Dweb.cisco.com_1cFasDB-5Fkkp19Ri6C4NTgSGk39cBX-5FQF8Xn6DTqLzEL0ijtRrKn9gGLKXPGMHF0rrpS7AHZXUEHFchYfU-2Di08pRgke3QTkgyYR60jav1vUCef7Y-5FhfWdJr6A5EoeSXiE3GAXDGelk7GufWzF-2DPMrSGMVZIR19bEGVB2jmYRSCDg-5FY3Bx2mhfjHjvOTuf8LldH6lSBbyW8MTvNOy9n9Ilybk5z-2DjUdXNyixRmRmuioLC0jmip-2D-5F8jinrjB1qPyFmIVPsy-5FvCLy-5FyPiZMsrsgK7TqeETN4FLwh0W0ey1uMCUDDrqdSgpLcdyxmKWXuvt6ZPa7PjgeUFJfPT-2Du8RRYzHgEcJ4K0T5K2GXZqmlChCMOo_http-253A-252F-252Fbioconductor.org-252Fdevelopers-252Fhow-2Dto-252Fgit-252Fsync-2Dexisting-2Drepositori&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=8FW13IFEzMh6ofnZWE-pQBRqriZB_wUdNPOJFK6VqjQ&s=u2sFG4IufIt1g6tu-QFushAuaLvtlWi73NU-s-mAuhY&e=
es/
before BioC 3.11's freeze.
Thanks,
Leo
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