On quick glance into the logs on tokay2 it looks like it may be an issue with MotifDb and not your package. In merge_motif it doesn't get to evaluating the code as it is hung up on trying to load the MotifDb library. Once this library is called, There are numerous:
*** recursive gc invocation and somewhere in the middle of all these repeated lines is Error: package or namespace load failed for 'MotifDb': .onLoad failed in loadNamespace() for 'MotifDb', details: call: base::colSums(x, na.rm = na.rm, dims = dims, ...) error: bad binding access Execution halted Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Benjamin Jean-Marie Tremblay <benjamin.tremb...@uwaterloo.ca> Sent: Saturday, March 28, 2020 4:22 AM To: bioc-devel@r-project.org <bioc-devel@r-project.org> Subject: [Bioc-devel] Help with tokay2 errors Hi, Recently I've been having several examples fail on the tokay2 test machine, specifically the i386 examples. Unfortunately I don't have access to a windows machine to diagnose these failures right now, and the output that I can see shows no errors; the examples just end abruptly. I don't see these failures on my own computer (regular macOS, also docker bioc-devel image), so I�m at a bit of a loss as to how to go about fixing these. http://bioconductor.org/checkResults/devel/bioc-LATEST/universalmotif/tokay2-checksrc.html Any help would be greatly appreciated. Thanks, Benjamin Tremblay _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]]
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