It's important to ask 'why Bioconductor?' with the answer partly involving
interoperability with other Bioconductor packages and data representations
(e.g., http://bioconductor.org/developers/how-to/commonMethodsAndClasses/).
There wouldn't be much value in making something that is essentially a python
package without connection to Bioconductor available in Bioconductor.
Martin
On 3/24/20, 11:59 AM, "Bioc-devel on behalf of Daniele Muraro"
<bioc-devel-boun...@r-project.org on behalf of d...@sanger.ac.uk> wrote:
To whom it may concern,
I would like to upload onto Bioconductor a package which is currently
developed in python.
I was wondering if Bioconductor supports python dependencies or if I should
re-program the package in R exclusively. Is calling python from R using the
package "reticulate" acceptable for a package submission onto Bioconductor?
Thank you for your attention.
All the best,
Daniele Muraro
--
Daniele Muraro
Computational Biologist - Staff Scientist
Wellcome Sanger Institute
Wellcome Genome Campus
Hinxton, Cambridgeshire
CB10 1SA, UK
Phone (direct) +44 (0)1223 494766
Phone (reception) +44 (0)1223 834244
e-mail: daniele.mur...@sanger.ac.uk
Sanger profile:
https://www.sanger.ac.uk/people/directory/muraro-daniele
<https://www.sanger.ac.uk/people/directory/muraro-daniele>LinkedIn profile:
https://www.linkedin.com/in/daniele-muraro-a3557630/
--
The Wellcome Sanger Institute is operated by Genome Research
Limited, a charity registered in England with number 1021457 and a
company registered in England with number 2742969, whose registered
office is 215 Euston Road, London, NW1 2BE.
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