Thanks Nitesh, The only reason DMRcatedata isn't passing BiocCheck is because of package numbering and the fact that the old version already exists - which this new version is supposed to overwrite (http://bioconductor.org/spb_reports/DMRcatedata_buildreport_20190912205035.html)<http://bioconductor.org/spb_reports/DMRcatedata_buildreport_20190912205035.html#tokay1_buildsrc_anchor>. I understand the reviewer won't look at the package until it passes, but because this is an update of a (now) ExperimentData package can you ask the reviewer to overlook this please?
Best, Tim On 12/9/19 11:51 pm, Turaga, Nitesh wrote: Thanks Tim. The assigned reviewer will review your package and provide suggestions as needed. Best, Nitesh On Sep 12, 2019, at 3:15 AM, Tim Peters <t.pet...@garvan.org.au><mailto:t.pet...@garvan.org.au> wrote: Hi Nitesh, Thanks, I have transformed DMRcatedata into an ExperimentHub package and started an issue here https://github.com/Bioconductor/Contributions/issues/1247. Cheers, Tim On 23/8/19 3:46 am, Turaga, Nitesh wrote: Hi Tim, Based on what your have mentioned, it seems that DMRcatedata should become an experiment hub package. https://bioconductor.org/packages/devel/bioc/vignettes/ExperimentHub/inst/doc/CreateAnExperimentHubPackage.html Please take a look that vignette. Let me know if you have any questions. Nitesh On Aug 21, 2019, at 7:49 PM, Tim Peters <t.pet...@garvan.org.au><mailto:t.pet...@garvan.org.au> wrote: Hello, I have a major update of DMRcate and its associated data package, DMRcatedata. They both pass R CMD check and BiocCheck for R 3.6.1. Because the new version of DMRcate depends on the updated DMRcatedata package, can I host DMRcatedata (it's ~28MB) somewhere for you to download and update Bioconductor, and then I can sync the new version of DMRcate please? Best, Tim -- =================== Tim Peters, PhD Bioinformatics Research Officer | Immunogenomics Laboratory | Immunology Division Garvan Institute of Medical Research 384 Victoria St., Darlinghurst, NSW, Australia 2010 E: t.pet...@garvan.org.au<mailto:t.pet...@garvan.org.au> | W: http://www.garvan.org.au | P: +612 9295 8325 NOTICE Please consider the environment before printing this email. This message and any attachments are intended for the addressee named and may contain legally privileged/confidential/copyright information. If you are not the intended recipient, you should not read, use, disclose, copy or distribute this communication. If you have received this message in error please notify us at once by return email and then delete both messages. We accept no liability for the distribution of viruses or similar in electronic communications. This notice should not be removed. _______________________________________________ Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. -- =================== Tim Peters, PhD Bioinformatics Research Officer | Immunogenomics Laboratory | Immunology Division Garvan Institute of Medical Research 384 Victoria St., Darlinghurst, NSW, Australia 2010 E: t.pet...@garvan.org.au<mailto:t.pet...@garvan.org.au> | W: http://www.garvan.org.au | P: +612 9295 8325 NOTICE Please consider the environment before printing this email. This message and any attachments are intended for the addressee named and may contain legally privileged/confidential/copyright information. If you are not the intended recipient, you should not read, use, disclose, copy or distribute this communication. If you have received this message in error please notify us at once by return email and then delete both messages. We accept no liability for the distribution of viruses or similar in electronic communications. This notice should not be removed. This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. -- =================== Tim Peters, PhD Bioinformatics Research Officer | Immunogenomics Laboratory | Immunology Division Garvan Institute of Medical Research 384 Victoria St., Darlinghurst, NSW, Australia 2010 E: t.pet...@garvan.org.au<mailto:t.pet...@garvan.org.au> | W: http://www.garvan.org.au | P: +612 9295 8325 NOTICE Please consider the environment before printing this email. This message and any attachments are intended for the addressee named and may contain legally privileged/confidential/copyright information. 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