I see, thank you Martin!
Zhezhen
________________________________
From: Martin Morgan <mtmorgan.b...@gmail.com>
Sent: Tuesday, August 20, 2019 11:15 AM
To: Zhezhen Wang <zhez...@uchicago.edu>; Vincent Carey
<st...@channing.harvard.edu>
Cc: bioc-devel@r-project.org <bioc-devel@r-project.org>
Subject: Re: [Bioc-devel] BiocCheck error
I think this is from BiocCheck, needing access to CRAN / Bioconductor to look
at package status. Likely there are issues accessing these sites
(BiocManager::repositories()) from your computer. It seems not to be an issue
that you as developer need to worry about, provided you are confident that you
are using current packages.
Martin
On 8/20/19, 12:04 PM, "Bioc-devel on behalf of Zhezhen Wang"
<bioc-devel-boun...@r-project.org on behalf of zhez...@uchicago.edu> wrote:
The github repo is https://github.com/xyang2uchicago/NPS
________________________________
From: Vincent Carey <st...@channing.harvard.edu>
Sent: Tuesday, August 20, 2019 10:52 AM
To: Zhezhen Wang <zhez...@uchicago.edu>
Cc: bioc-devel@r-project.org <bioc-devel@r-project.org>
Subject: Re: [Bioc-devel] BiocCheck error
If your package that generates the error is in a github repo, please give
the details.
If it is already in Bioconductor please give the name of the package and
ensure we can
get access to the code that is generating the error. In general it is very
hard to help unless
we can reproduce the error you report.
On Tue, Aug 20, 2019 at 11:38 AM Zhezhen Wang
<zhez...@uchicago.edu<mailto:zhez...@uchicago.edu>> wrote:
Hi I am running BiocCheck on my new package and I get the following error
message
* Checking for deprecated package usage... Warning in readLines(file,
skipNul = TRUE) : InternetOpenUrl failed: 'The server name or address could not
be resolved' Error in readLines(file, skipNul = TRUE) : cannot open the
connection
May I know what this error message means and how I can correct it?
Zhezhen
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