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Best, Jim On Mon, Jul 29, 2019 at 4:32 PM Jaehyun Lee <jaehy...@andrew.cmu.edu> wrote: > Hello, > > My name is Jaehyun Lee, an undergraduate student at Carnegie Mellon > University conducting developmental biology research. I am currently trying > to run CAGEr using bam files from the CAGE experiment and from my own > reference genome. However, the specific genome that I need is not available > in BSgenome. Is there a way of using CAGEr without using a genome from > BSgenome or is there a way to upload my genome to BSgenome? > > Thank you, > > Jae > Jaehyun Lee > Candidate for Bachelor of Science in Biological Sciences > Carnegie Mellon University, Class of 2020 > jaehy...@andrew.cmu.edu I 508.523.0203 > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > -- James W. MacDonald, M.S. Biostatistician University of Washington Environmental and Occupational Health Sciences 4225 Roosevelt Way NE, # 100 Seattle WA 98105-6099 [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
