Hi Simina, Now that the RELEASE_3_9 branch and pushes are available to everyone, I can help you with this.
It seems like your upstream branch is a little funny looking, is this how it got pasted in or maybe it's a mistake. What you gave: (I understand that the mailto: stuff may have been added later but auto format settings in email, but the trailing "g" at the end of the line is bugging me and I can't help but think it might be that) upstream [email protected]<mailto:[email protected]><mailto:[email protected]>:packages/MultiMed.g (fetch) upstream [email protected]<mailto:[email protected]>:packages/MultiMed.g (push) What it's supposed to be: upstream [email protected]<mailto:[email protected]>.org:packages/MultiMed.git (fetch) upstream. [email protected]<mailto:[email protected]>.org:packages/MultiMed.git (push) You can try first by resetting your upstream, git remote set-url upstream [email protected]<mailto:[email protected]>.org:packages/MultiMed.git Let me know if this works. Best, Nitesh On May 2, 2019, at 1:02 PM, Turaga, Nitesh <[email protected]<mailto:[email protected]>> wrote: Hi Simina, We are going through the release process for Bioc 3.9 now, so all commits are blocked until further notice. I can get back to helping you debug this issue once we are done with the release. https://stat.ethz.ch/pipermail/bioc-devel/2019-May/015050.html Best, Nitesh On May 2, 2019, at 12:58 PM, Simina Boca <[email protected]<mailto:[email protected]>> wrote: Thank you Nitesh and sorry for missing this initially! This one seems fine: C:\Users\smb310\Documents\GitHub\MultiMed [devel]> git remote -v origin https://github.com/SiminaB/MultiMed.git (fetch) origin https://github.com/SiminaB/MultiMed.git (push) upstream [email protected]<mailto:[email protected]>:packages/MultiMed.g (fetch) upstream [email protected]<mailto:[email protected]>:packages/MultiMed.g (push) However, it seems like I only have read, not write access to the package: C:\Users\smb310\Documents\GitHub\MultiMed [devel]> ssh -T [email protected]<mailto:[email protected]> | grep MultiMed Warning: Permanently added 'git.bioconductor.org<http://git.bioconductor.org/>,34.192.48.227' (ECDSA) to the list of known hosts. R packages/MultiMed Cheers, Simina On Tue, Apr 30, 2019 at 11:01 AM Turaga, Nitesh <[email protected]<mailto:[email protected]>> wrote: Hi Simina, http://bioconductor.org/developers/how-to/git/faq/ #14 to help us out a little more please. Best, Nitesh On Apr 30, 2019, at 10:45 AM, Simina Boca <[email protected]<mailto:[email protected]>> wrote: Hello, I am trying to update my package MultiMed https://www.bioconductor.org/packages/release/bioc/html/MultiMed.html. It's on Github at https://github.com/SiminaB/MultiMed. I got and updated the SSH key (since I am using a new computer) but when I try to "git fetch --all" I still get a permission-related error: C:\Users\smb310\Documents\GitNuh\Multimed [devel]> git fetch --all Fetching origin Fetching upstream Warning: Permanently added 'git.bioconductor.org<http://git.bioconductor.org/>,34.172.43.227' <ECDSA> to the list of known hosts. FATAL: R any packages/MultiMed.g SiminaB DENIED by fallthru (or you mis-spelled the reponame) fatal: Could not read from remote repository. Please make sure you have the current access rights and the repository exists. error: Could not fetch upstream I appreciate your help! Cheers, Simina -- Simina M. Boca Assistant Professor Innovation Center for Biomedical Informatics (ICBI) Departments of Oncology and Biostatistics, Bioinformatics and Biomathematics | Georgetown University Medical Center Cancer Prevention and Control Program | Lombardi Comprehensive Cancer Center 2115 Wisconsin Ave NW, Suite 110, Washington, DC 20007 Phone: (202) 687-1545, Fax: (202) 687-5011 http://icbi.georgetown.edu/boca https://sites.google.com/georgetown.edu/siminaboca/ [[alternative HTML version deleted]] _______________________________________________ [email protected]<mailto:[email protected]> mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. -- Simina M. Boca Assistant Professor Innovation Center for Biomedical Informatics (ICBI) Departments of Oncology and Biostatistics, Bioinformatics and Biomathematics | Georgetown University Medical Center Cancer Prevention and Control Program | Lombardi Comprehensive Cancer Center 2115 Wisconsin Ave NW, Suite 110, Washington, DC 20007 Phone: (202) 687-1545, Fax: (202) 687-5011 http://icbi.georgetown.edu/boca https://sites.google.com/georgetown.edu/siminaboca/ This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ [email protected] mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ [email protected] mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
