Hi,
The most recent build of chimeraviz failed due to a test failure:
https://master.bioconductor.org/checkResults/3.9/bioc-LATEST/chimeraviz/malbec2-checksrc.html.
That the test in question should suddenly fail surprises me, and I'm unable
to reproduce this locally. Does anyone have ideas as to how I can dig
deeper into this?
Thank you!
Here's an excerpt from build log in case it disappears when the new build
is done:
```
* checking tests ...
Running ‘testthat.R’
ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
>
> test_check("chimeraviz")
── 1. Failure: get_ensembl_ids gets the correct Ensembl gene ids for a
fusion ob
fusion@gene_upstream@ensembl_id not equal to
`correct_ensembl_id_upstream`.
Lengths differ: 2 is not 1
══ testthat results
═══════════════════════════════════════════════════════════
OK: 170 SKIPPED: 0 FAILED: 1
1. Failure: get_ensembl_ids gets the correct Ensembl gene ids for a
fusion object (@test_utilities.R#217)
Error: testthat unit tests failed
```
--
Stian Lågstad
+47 41 80 80 25
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