A good place to start is to verify that your packages are all from the same 
release

BiocManager::valid()

and then if that is not revealing make sure to start a new R session, attach 
SummarizedExperiment, and report the output of sessionInfo().

Martin

On 12/1/18, 8:16 PM, "Bioc-devel on behalf of Lan Huong Nguyen" 
<bioc-devel-boun...@r-project.org on behalf of nlhuon...@gmail.com> wrote:

    Hi everyone,
    
    I am working with R 3.6 on macOS mojave, and I installed the
    SummarizedExperiment from BiocManager 3.9. Whenever the package is loaded I
    get the following warning:
    
    Warning: multiple methods tables found for ‘lengths'
    
    Did anyone encounter this problem? Any suggestions for fixes?
    
    Best,
    Lan
    
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