Hi Sam,
I have updated your “master” branch on git.bioconductor.com to reflect what you
have on GitHub, at https://github.com/rafalab/bumphunter. You will not get the
duplicate commit error when you push to the master branch anymore.
However, RELEASE_3_8 still has duplicate commits in the history. You could
follow the same procedure as you did for the master branch, and de-duplicate
the commit history for RELEASE_3_8. You should invest time in this only if you
think there will be any changes made to the release branch. If not, then this
is not an issue. If you do choose to follow through with RELEASE_3_8 as well,
please reply to this thread when you have made the de-duplication changes and
added the branch to your GitHub repository.
Best regards,
Nitesh
> On Nov 2, 2018, at 5:09 PM, Samuela Pollack <spoll...@jimmy.harvard.edu>
> wrote:
>
> Dear Bioconductor,
>
> I believe I have removed all duplicate commits from the bumphunter package.
> The main branch in rafalab/bumphunter incorporates the new commit history. It
> passes 'library(devtools); build("."); install(); check("."); BiocCheck(".")'
>
> I am contacting you in accordance with item 6 of the instructions at this
> URL: http://bioconductor.org/developers/how-to/git/resolve-duplicate-commits/
>
> - Sam
>
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