Dear all,
I am the developer of cTRAP <https://github.com/nuno-agostinho/cTRAP>, a
package that I recently submitted for approval to Bioconductor:
https://github.com/Bioconductor/Contributions/issues/906
<https://github.com/Bioconductor/Contributions/issues/906>.
The package makes use of ENCODE and L1000 datasets downloaded from the web and
the examples for such functions include downloading some sample files. However,
this makes R CMD check take more than 5 minutes and labels my package with
WARNING. Should I simply mark the examples of "slow" functions with \dontrun? I
do not think that is the optimal approach, but it is certainly the easiest
solution to pass the 5 minute requirement of R CMD check.
Thank you for your time!
Best regards,
Nuno Agostinho
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