Hi, I'm preparing a package for submission to bioconductor, but hitting the 4mb size limit due to examples in my vignette.
I do have a demo toy sized dataset which I use for the bulk of the vignette. But I wanted to show real-data examples at the end because approach doesn't work well on toy-sized data. Conceivably everything except for the 'examples' section would make a 'complete' vignette (but probably not a very helpful one...). I'm wondering if I should static-ify just those examples? Might hit the 50% runnable code-chunk limit then though. Unfortunately its a rank-based approach so i can't really take the top 100 genes for these particuar objects. Not sure how best to solve this, any tips/suggestions? Thanks! (The problematic vignette is here: https://bioinformatics.erc.monash.edu/home/sarah.williams/projects/cell_groupings/doco/celaref_doco.html ) NB: To make matters worse this is a tool for comparing datasets - so I have multiples! They are public datasets and I haven't done anything exciting with them (nor would anyone else want to reuse processed objects) - so I don't think that I should make a data package. NB: Using xz compression and some cleanup I got it down to 21mb, from 49mb - So its not huge but I don't think I can get to <4mb this way. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
