On 07/09/2018 11:00 AM, Sergio Picart Armada wrote:
Thank you Morgan,
I already fixed this by skipping the offending test on win32.
I fixed the devel version, but the release version has not noticed the
version bump (from 1.0.0 to 1.0.1).
Did I forget anything?
builds are nightly, not on commit. You made your change on
commit 71e725742eafa45a71e49d76441383dda26621c3
Author: Sergi Picart <elpic...@gmail.com>
Date: Mon Jul 9 12:53:04 2018 +0200
Version number bump
so the build system has not had a chance to build. Look at the
'snapshot' date on the build report page for the date that the most
recent build started.
Martin
Thank you again,
On Monday, May 21, 2018 18:58 CEST, Hervé Pagès <hpa...@fredhutch.org>
wrote:
On 05/21/2018 05:50 AM, Martin Morgan wrote:
> Remember that 32-bit Windows can only address vectors that are less than
> 2^32 - 1 elements long -- it looks like your example is trying to do
> more than this, and the solution is to implement a more modest example.
32-bit Windows limits the amount of memory used by a single process to
a little bit less than 3GB. So I think you can actually create vectors
that have more than 2^32 elements as long as the total memory used by
R doesn't exceeds 3GB.
One more thing: since this is a 32-bit Windows issue, you should be able
to reproduce this locally by starting R in 32-bit mode:
R --arch i386
Hope this helps,
H.
>
> Martin
>
> On 05/18/2018 04:05 AM, Sergio Picart Armada wrote:
>>
>> Dear Bioconductor team,
>>
>> I'm the maintainer of the FELLA package.
>> Lately the check in tokay2 has failed, see
>>
https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_checkResults_release_bioc-2DLATEST_FELLA_tokay2-2Dchecksrc.html&d=DwIDaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=-81iJhkqlvXvFLUkNuwd1vRA5eMW-Cf9eDiFgGMLDuk&s=e4cRnI7RwkBDHiDNJodfgLbk-BNKmO6OZsD1MoUHxLc&e=
>>
>> Specifically: Message: At vector.pmt:442 : cannot reserve space for
>> vector, Out of memory
>> Class: simpleError/error/conditionIt only happens in tokay2 and I
>> cannot reproduce this locally.
>> Is this something on the server side or should I take action?
>>
>> Thank you,
>> Sergi
>>
>> [[alternative HTML version deleted]]
>>
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--
Hervé Pagès
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
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P.O. Box 19024
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E-mail: hpa...@fredhutch.org
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