Dear BioMedR maintainer, Unfortunately BioMedR was removed from Bioconductor as of Release 3.6 (last Oct). We reached out several times before the 3.6 release as your package had been failing since early July 2017. Part of the Bioconductor guidelines require that packages are actively maintained and fixed in a timely manner. Packages are built daily indicating if there are ERROR's or WARNING's and should be occasionally checked:
http://bioconductor.org/checkResults/ Besides emailing you privately several times, it was also posted before the release on the support site and devel mailing list (bioc-devel@r-project.org) links given below - giving time to respond before officially being deprecated. And you would have recieved email notifications from bbs-nore...@bioconductor.org indicating build failures. https://support.bioconductor.org/p/100984/ https://support.bioconductor.org/p/100199/ https://stat.ethz.ch/pipermail/bioc-devel/2017-September/011522.html As you remained unresponsive and the package remained broken it began the deprecation and end-of-life process. If you would like to revive the package, it would need to go through the package review process again and at this point is too late to be included in the Bioc 3.7 release. You can have it reviewed and accepted to be re-included in Bioc 3.8 later this year. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Zhu MF <wind2...@163.com> Sent: Monday, April 16, 2018 12:32:10 PM To: bioc-devel@r-project.org Subject: [Bioc-devel] Can not push to bioconductor! please help me! dear sir: contents in GitHub and that in bioconductor are not the same. I want to update the package to follow the contents in github, but falied: git remote -v origin g...@github.com:wind22zhu/BioMedR.git (fetch) origin g...@github.com:wind22zhu/BioMedR.git (push) upstream g...@git.bioconductor.org:packages/BioMedR.git (fetch) upstream g...@git.bioconductor.org:packages/BioMedR.git (push) $ git push upstream master Enter passphrase for key '/c/Users/ifyoung/.ssh/id_rsa': FATAL: W any packages/BioMedR wind22zhu DENIED by fallthru (or you mis-spelled the reponame) fatal: Could not read from remote repository. Please make sure you have the correct access rights and the repository exists. $ ssh -T g...@git.bioconductor.org R packages/BioMedR No WRITE(W) permissions? Why? Can you help me ? I have been stucked here for several days! [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
