While we wait for the changes to come online: would you be open to PRs to workflow.md? I was thinking of making a nested list for the Introduction/part 1/part 2/part 3, which is a bit nicer to read.
-A On 12/12/17 22:11, Andrzej Oleś wrote: > Thanks for you feedback Aaron! > > On Tue, Dec 12, 2017 at 9:49 PM, Aaron Lun <a...@wehi.edu.au > <mailto:a...@wehi.edu.au>> wrote: > > Thanks Andrzej. > > > Thank you. I've edited the workflow index page by introducing a separate > > "Single-cell Workflows" section, and by substituting the previous link > to > > your workflow by links to the individual parts. > > Great, I'm looking forward to seeing it. Do you know how frequently the > index page (I assume we're talking about > https://bioconductor.org/help/workflows/ > <https://bioconductor.org/help/workflows/>) updates? I assume your edits > haven't propagated through the system yet. > > > Not sure, should be online by now > https://github.com/Bioconductor/bioconductor.org/commit/a60c46f0942d9825f9a643321890ba5987de109b > > > > As discussed during EuroBioc, I'm happy to restructure the index page by > > grouping workflows by topic. It would be really helpful if authors would > > chime in to suggest the most relevant sections for their workflows. > > I can chip in with two that I'm involved in: > > "Differential Binding from ChIP-seq data > <https://bioconductor.org/help/workflows/chipseqDB/ > <https://bioconductor.org/help/workflows/chipseqDB/>>" => ChIP-seq > workflows > "Gene-level RNA-seq differential expression and pathway analysis > <https://bioconductor.org/help/workflows/RnaSeqGeneEdgeRQL/ > <https://bioconductor.org/help/workflows/RnaSeqGeneEdgeRQL/>>" => > RNA-seq > workflows > > Of course, it depends on how granular you want the topics to be. For > example, I only see one ChIP-seq workflow, so that particular section > might be a bit lonely for a while (I am planning to split that into two > workflows later). > > > Right, we should probably avoid hair-splitting. We can start with a few, > say 6, and split up further according to demand as new ones are introduced. > > Best, > Andrzej _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
