The missing CRAN packages on tokay2 is a known issue: https://stat.ethz.ch/pipermail/bioc-devel/2017-November/012265.html https://stat.ethz.ch/pipermail/bioc-devel/2017-November/012340.html
The XML landing page does say 'orphaned' but I don't think there are plans to remove it from CRAN any time soon. Maybe someone else has more information ... Valerie On 11/24/2017 05:34 PM, Vladislav Petyuk wrote: Some Bioconductor packages depend on CRAN XML package. For example http://bioconductor.org/checkResults/devel/bioc-LATEST/mzID/tokay2-install.html This dependency is not available on tokay2 machine. I also noticed this XML package is orphaned on CRAN. What are the plans regarding this core package? Is tokay2 simply missing this dependency by mistake or it is superseded by something else? [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel