Hello all,
The complete set of OrgDb packages have been added to AnnotationHub as well as
the newly added TxDb. They will be immediatly available following the release
and using the release Bioc 3.6.
The following example:
> library(AnnotationHub)
> hub = AnnotationHub()
updating metadata: retrieving 1 resource
|======================================================================|
100%
snapshotDate(): 2017-10-27
> query(hub, "OrgDb")
AnnotationHub with 1019 records
> table(mcols(query(hub, "OrgDb"))$rdatadateadded)
2017-10-23 2017-10-27
19 1000
> query(hub, "TxDb")
AnnotationHub with 45 records
> table(mcols(query(hub, "TxDb"))$rdatadateadded)
2016-12-22 2017-04-11 2017-04-13 2017-10-24
29 1 5 10
Cheers,
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
This email message may contain legally privileged and/or confidential
information. If you are not the intended recipient(s), or the employee or
agent responsible for the delivery of this message to the intended
recipient(s), you are hereby notified that any disclosure, copying,
distribution, or use of this email message is prohibited. If you have received
this message in error, please notify the sender immediately by e-mail and
delete this email message from your computer. Thank you.
[[alternative HTML version deleted]]
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
