On 05/19/2017 12:14 PM, Michael Lawrence wrote:
Since SeqArray already imports SummarizedExperiment and
VariantAnnotation, why can't it just move them to Depends and use
their generics?
do they need to be moved to Depends? Or simply import the generic export
the new method(s) (and generic)?
Martin
On Fri, May 19, 2017 at 8:39 AM, Stephanie M. Gogarten
<sdmor...@u.washington.edu> wrote:
Dear Core Team,
What do you think about adding the following generics to BiocGenerics?
colData
rowRanges
ref
alt
qual
filt
header
fixed
info
geno
They are currently defined by both VariantAnnotation/SummarizedExperiment
and SeqArray. Given the increasingly widespread use of VCF files, it seems
likely that other packages may want to use them in future also.
Stephanie
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
This email message may contain legally privileged and/or...{{dropped:2}}
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
